SMTL ID : 4ieh.1

Crystal Structure of human Bcl-2 in complex with a small molecule inhibitor targeting Bcl-2 BH3 domain interactions

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x 1E9: N-(6-{4-[(4'-chlorobiphenyl-2-yl)methyl]piperazin-1-yl}-1,1-dioxido-1,2-benzothiazol-3-yl)-4-{[(2R)-4-(dimethylamino)-1-(phenylsulfanyl)butan-2-yl]amino}-3-nitrobenzenesulfonamide(Non-covalent)

1E9.1: 21 residues within 4Å: Chain A: A.62, D.65, F.66, R.69, Y.70, D.73, F.74, M.77, V.95, E.98, L.99, N.105, W.106, G.107, R.108, V.110, A.111, F.115, V.118, F.160, Y.164 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:F.66, A:F.66, A:F.66, A:Y.70, A:M.77, A:V.95, A:L.99, A:R.108, A:V.110, A:F.115, A:Y.164 Hydrogen bonds: A:R.69, A:N.105, A:W.106, A:G.107 Water bridges: A:Y.164, A:Y.164 Salt bridges: A:D.65, A:D.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Toure, B.B. et al., The role of the acidity of N-heteroaryl sulfonamides as inhibitors of bcl-2 family protein-protein interactions. ACS Med Chem Lett (2013)

Release Date

2013-07-10

Peptides

Apoptosis regulator Bcl-2, Bcl-2-like protein 1 chimera: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Apoptosis regulator Bcl-2, Bcl-2-like protein 1 chimera