SMTL ID : 4ifh.1 (2 other biounits)

Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM44619

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.29 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.79, H.83, E.160 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.79, A:H.83, A:E.160, A:E.160, H2O.1 ZN.2: 4 residues within 4Å: Chain B: H.79, H.83, E.160 Ligands: 1EF.3 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.79, B:H.83, B:E.160, B:E.160

1 x 1EF: N-({1-[(2R)-4-(hydroxyamino)-1-(naphthalen-2-yl)-4-oxobutan-2-yl]-1H-1,2,3-triazol-4-yl}methyl)-4-methylbenzamide(Non-covalent)

1EF.3: 14 residues within 4Å: Chain B: H.79, E.82, H.83, F.86, S.99, S.109, N.110, A.111, E.160, F.791, R.795, Y.802, V.804 Ligands: ZN.2 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:F.791, B:Y.802 Hydrogen bonds: B:E.82, B:E.82 pi-Stacking: B:H.83, B:F.791

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deprez-Poulain, R. et al., Catalytic site inhibition of insulin-degrading enzyme by a small molecule induces glucose intolerance in mice. Nat Commun (2015)

Release Date

2013-12-18

Peptides

Insulin-degrading enzyme: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Insulin-degrading enzyme

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