SMTL ID : 4iio.1

Crystal Structure of the Second SH3 Domain of ITSN2 Bound with a Synthetic Peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-2-1-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: W.17, T.18, A.19 Ligand excluded by PLIP

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: K.29, H.30 Chain B: K.29, H.30 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Water bridges: B:K.29, A:K.29 Salt bridges: B:K.29, B:H.30, A:K.29, A:H.30

15 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 3 residues within 4Å: Chain A: N.26, F.27 Ligands: UNX.5 No protein-ligand interaction detected (PLIP) UNX.4: 1 residues within 4Å: Chain A: H.48 No protein-ligand interaction detected (PLIP) UNX.5: 4 residues within 4Å: Chain A: K.20, N.26 Chain B: N.26 Ligands: UNX.3 No protein-ligand interaction detected (PLIP) UNX.6: 3 residues within 4Å: Chain A: N.23, F.44, G.52 No protein-ligand interaction detected (PLIP) UNX.7: 1 residues within 4Å: Ligands: UNX.8 No protein-ligand interaction detected (PLIP) UNX.8: 4 residues within 4Å: Chain A: Q.38, Q.39, E.40 Ligands: UNX.7 No protein-ligand interaction detected (PLIP) UNX.9: 2 residues within 4Å: Chain A: H.24, W.42 No protein-ligand interaction detected (PLIP) UNX.10: 3 residues within 4Å: Chain A: S.16 Chain B: S.28, K.29 No protein-ligand interaction detected (PLIP) UNX.11: 1 residues within 4Å: Chain B: K.60 No protein-ligand interaction detected (PLIP) UNX.12: 2 residues within 4Å: Ligands: UNX.13, UNX.14 No protein-ligand interaction detected (PLIP) UNX.13: 3 residues within 4Å: Chain B: Q.38, E.40 Ligands: UNX.12 No protein-ligand interaction detected (PLIP) UNX.14: 1 residues within 4Å: Ligands: UNX.12 No protein-ligand interaction detected (PLIP) UNX.15: 1 residues within 4Å: Chain B: W.43 No protein-ligand interaction detected (PLIP) UNX.16: 2 residues within 4Å: Chain C: Y.8, L.9 No protein-ligand interaction detected (PLIP) UNX.17: 1 residues within 4Å: Chain C: X.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guan, X. et al., Crystal Structure of the Second SH3 Domain of ITSN2 Bound with a Synthetic Peptide. TO BE PUBLISHED

Release Date

2013-12-25

Peptides

Intersectin-2: AB
Synthetic Peptide: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Intersectin-2

Synthetic Peptide