SMTL ID : 4ika.1

Crystal structure of EV71 3Dpol-VPg

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 4 residues within 4Å: Chain A: W.5, H.271, H.273, C.282 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.271, H2O.1 NI.2: 1 residues within 4Å: Chain A: H.31 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.31, H2O.5, H2O.6, H2O.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, C. et al., Crystal structure of enterovirus 71 RNA-dependent RNA polymerase complexed with its protein primer VPg: implication for a trans mechanism of VPg uridylylation. J.Virol. (2013)

Release Date

2013-09-04

Peptides

3Dpol: A
VPg: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

3Dpol

VPg