SMTL ID : 4ikh.1

Crystal structure of a glutathione transferase family member from Pseudomonas fluorescens pf-5, target efi-900003, with two glutathione bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

4 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 14 residues within 4Å: Chain A: T.30, N.32, K.35, F.54, Q.59, M.60, N.71, K.72, I.73, P.74, E.91, S.92, M.125 Ligands: GSH.3 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:K.72 Hydrogen bonds: A:N.32, A:Q.59, A:I.73, A:I.73, A:I.73, A:E.91, A:E.91, A:S.92 Water bridges: A:K.35, A:K.72, A:K.72, A:K.72 Salt bridges: A:K.35, A:K.72 GSH.3: 10 residues within 4Å: Chain A: N.32, K.72, G.129, P.130, G.133, W.191, Y.199 Chain B: G.126, R.154 Ligands: GSH.1 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.126, A:N.32, A:K.72 Salt bridges: B:R.154 GSH.4: 14 residues within 4Å: Chain B: T.30, N.32, K.35, F.54, Q.59, M.60, N.71, K.72, I.73, P.74, E.91, S.92, M.125 Ligands: GSH.6 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:K.72 Hydrogen bonds: B:N.32, B:Q.59, B:I.73, B:I.73, B:I.73, B:E.91, B:E.91, B:S.92 Water bridges: B:K.35, B:K.72, B:K.72, B:K.72 Salt bridges: B:K.35, B:K.72 GSH.6: 10 residues within 4Å: Chain A: G.126, R.154 Chain B: N.32, K.72, G.129, P.130, G.133, W.191, Y.199 Ligands: GSH.4 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:G.126, B:N.32, B:K.72 Salt bridges: A:R.154

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: Q.119, W.120 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain B: Q.119, W.120 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Crystal structure of a glutathione transferase family member from Pseudomonas fluorescens pf-5, target efi-900003, with two glutathione bound. To be Published

Release Date

2013-01-16

Peptides

Glutathione S-transferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glutathione S-transferase