SMTL ID : 4imp.2 (1 other biounit)

The missing linker: a dimerization motif located within polyketide synthase modules

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.57 Å

Oligo State

homo-dimer

Ligands

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 27 residues within 4Å: Chain A: G.309, L.311, G.312, A.313, V.314, S.334, R.335, R.336, C.362, D.363, V.364, A.385, A.386, G.387, A.408, K.409, F.431, S.432, S.433, Y.446, W.472, G.473, S.474, W.475, G.479, M.480, A.481 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:W.472 Hydrogen bonds: A:A.313, A:V.314, A:S.334, A:S.334, A:R.335, A:R.336, A:D.363, A:V.364, A:A.385, A:G.387, A:K.409, A:Y.446, A:W.475, A:M.480, A:A.481 Salt bridges: A:R.335, A:R.336 NDP.2: 26 residues within 4Å: Chain B: G.309, G.312, A.313, V.314, S.334, R.335, R.336, C.362, D.363, V.364, A.385, A.386, G.387, A.408, K.409, F.431, S.432, S.433, Y.446, W.472, G.473, S.474, W.475, G.479, M.480, A.481 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:W.472 Hydrogen bonds: B:A.313, B:V.314, B:S.334, B:S.334, B:R.335, B:R.336, B:D.363, B:V.364, B:A.385, B:G.387, B:K.409, B:W.475, B:M.480, B:A.481 Salt bridges: B:R.335

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, J. et al., The missing linker: a dimerization motif located within polyketide synthase modules. Acs Chem.Biol. (2013)

Release Date

2013-03-27

Peptides

Polyketide synthase extender modules 3-4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Polyketide synthase extender modules 3-4

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