SMTL ID : 4iqz.3 (4 other biounits)

The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

11 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 1 residues within 4Å: Chain A: V.56 Ligand excluded by PLIP IOD.2: 3 residues within 4Å: Chain A: S.58, I.204, S.205 Ligand excluded by PLIP IOD.3: 1 residues within 4Å: Chain A: N.68 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain A: N.108 Ligand excluded by PLIP IOD.5: 1 residues within 4Å: Chain A: T.65 Ligand excluded by PLIP IOD.6: 3 residues within 4Å: Chain A: T.113, P.115, R.212 Ligand excluded by PLIP IOD.7: 3 residues within 4Å: Chain A: F.123, D.171, A.172 Ligand excluded by PLIP IOD.8: 2 residues within 4Å: Chain A: T.182, D.183 Ligand excluded by PLIP IOD.9: 3 residues within 4Å: Chain A: L.49, S.54, D.96 Ligand excluded by PLIP IOD.10: 3 residues within 4Å: Chain A: R.67, N.68, Y.88 Ligand excluded by PLIP IOD.11: 2 residues within 4Å: Chain A: S.66, R.67 Ligand excluded by PLIP

2 x NA: SODIUM ION(Non-functional Binders)

NA.12: 8 residues within 4Å: Chain A: I.64, S.66, R.67, N.68, T.69, V.86, P.87, Y.88 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.69, A:V.86 NA.13: 4 residues within 4Å: Chain A: V.56, N.57, S.205, S.206 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bhandari, V. et al., The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli. To be Published

Release Date

2013-02-13

Peptides

DNA-directed RNA polymerase subunit beta': A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

DNA-directed RNA polymerase subunit beta'

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