SMTL ID : 4isf.1

Human glucokinase in complex with novel activator (2S)-3-cyclohexyl-2-(6-fluoro-2,4-dioxo-1,4-dihydroquinazolin-3(2H)-yl)-N-(1,3-thiazol-2-yl)propanamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

monomer

Ligands

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.1: 9 residues within 4Å: Chain A: N.197, D.198, T.199, I.218, G.222, C.223, N.224, E.249, E.283 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.197, A:N.197, A:N.224, A:E.249, A:E.249 Water bridges: A:G.222, A:Q.280, A:Q.280

1 x 1FX: (2S)-3-cyclohexyl-2-(6-fluoro-2,4-dioxo-1,4-dihydroquinazolin-3(2H)-yl)-N-(1,3-thiazol-2-yl)propanamide(Non-covalent)

1FX.2: 15 residues within 4Å: Chain A: Y.54, V.55, R.56, S.57, T.58, P.59, W.92, M.203, I.204, Y.207, C.213, M.228, V.448, K.451, K.452 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.55, A:W.92, A:I.204, A:Y.207, A:Y.207, A:Y.207 Hydrogen bonds: A:R.56, A:R.56 pi-Stacking: A:W.92, A:W.92, A:W.92, A:Y.207

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 4 residues within 4Å: Chain A: T.53, V.196, N.197, K.452 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheruvallath, Z.S. et al., Design, synthesis and SAR of novel glucokinase activators. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-03-20

Peptides

Glucokinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glucokinase

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