SMTL ID : 4isg.1

Human glucokinase in complex with novel activator (2S)-3-cyclohexyl-2-[4-(methylsulfonyl)-2-oxopiperazin-1-yl]-N-(1,3-thiazol-2-yl)propanamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.64 Å

Oligo State

monomer

Ligands

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.1: 9 residues within 4Å: Chain A: N.197, D.198, T.199, I.218, G.222, C.223, N.224, E.249, E.283 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.197, A:N.197, A:D.198, A:N.224, A:E.249 Water bridges: A:G.251, A:Q.280

1 x 1FY: (2S)-3-cyclohexyl-2-[4-(methylsulfonyl)-2-oxopiperazin-1-yl]-N-(1,3-thiazol-2-yl)propanamide(Non-covalent)

1FY.2: 16 residues within 4Å: Chain A: Y.54, V.55, R.56, S.57, T.58, P.59, E.60, Q.91, W.92, M.203, Y.207, C.213, M.228, V.448, K.451, K.452 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.207 Hydrogen bonds: A:R.56, A:R.56, A:Q.91, A:W.92

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 4 residues within 4Å: Chain A: T.53, V.196, N.197, K.452 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheruvallath, Z.S. et al., Design, synthesis and SAR of novel glucokinase activators. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-03-20

Peptides

Glucokinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glucokinase

Related Entries With Identical Sequence