SMTL ID : 4iua.11 (11 other biounits)

Crystal Structure of the NK2 Fragment (31-290) of the mouse Hepatocyte Growth Factor/Scatter Factor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

homo-dimer

Ligands

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 8 residues within 4Å: Chain A: F.135, E.156, G.158, G.159, W.161, F.163, R.170, Y.171 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.158 Salt bridges: A:E.156, A:E.156, A:R.170 pi-Cation interactions: A:Y.171 EPE.5: 8 residues within 4Å: Chain B: F.135, E.156, G.158, G.159, W.161, F.163, R.170, Y.171 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:G.158, B:G.159 Salt bridges: B:E.156, B:E.156, B:R.170 pi-Cation interactions: B:W.161, B:W.161

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: K.36, R.66, R.68 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.66, A:R.68 SO4.3: 8 residues within 4Å: Chain A: T.56, Y.140, R.141, G.142, K.143, D.144, L.145, Q.146 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.142, A:K.143, A:D.144, A:L.145, A:Q.146 SO4.4: 4 residues within 4Å: Chain A: K.203, T.204, L.247, D.248 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.204, A:T.204, A:D.248 SO4.6: 6 residues within 4Å: Chain B: R.141, G.142, K.143, D.144, L.145, Q.146 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.142, B:K.143, B:D.144, B:L.145, B:Q.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tolbert, W.D. et al., Crystal Structure of the NK2 Fragment of the mouse Hepatocyte Growth Factor/Scatter Factor. To be Published

Release Date

2013-02-13

Peptides

Hepatocyte growth factor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
H

Hepatocyte growth factor

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