SMTL ID : 4iuf.1

Crystal Structure of Human TDP-43 RRM1 Domain in Complex with a Single-stranded DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

monomer

Ligands

1 x DG- DT- DT- DG- XUA- DG- DC- DG- DT: 5'-D(*GP*TP*TP*GP*(XUA)P*GP*CP*GP*T)-3'(Non-covalent)

DG-DT-DT-DG-XUA-DG-DC-DG-DT.1: 20 residues within 4Å: Chain A: D.3, I.5, L.7, G.8, L.9, P.10, W.11, M.30, Q.32, K.34, H.41, K.43, G.44, F.45, F.47, R.69, K.74, L.75, P.76, N.77 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuo, P.H. et al., The crystal structure of TDP-43 RRM1-DNA complex reveals the specific recognition for UG- and TG-rich nucleic acids. Nucleic Acids Res. (2014)

Release Date

2014-01-29

Peptides

TAR DNA-binding protein 43: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TAR DNA-binding protein 43