SMTL ID : 4iv0.2 (1 other biounit)

Crystal structure of N-methyl transferase from Plasmodium vivax complexed with S-adenosyl methionine and phosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: Q.35, Y.44, Y.177, Y.192, R.196, Y.198, K.264 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:Q.35, A:Y.44, A:Y.192, A:Y.192, A:Y.198 Water bridges: A:Y.177, A:Y.177, A:R.196, A:R.196 Salt bridges: A:R.196, A:K.264

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.2: 17 residues within 4Å: Chain A: Y.36, Y.52, I.53, S.54, G.80, G.82, D.102, I.103, C.104, M.107, K.126, D.127, I.128, R.144, D.145, S.146, H.149 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:I.53 Hydrogen bonds: A:I.53, A:G.80, A:I.103, A:C.104, A:D.127, A:I.128, A:R.144, A:S.146 Water bridges: A:R.144

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.3: 1 residues within 4Å: Chain A: C.104 No protein-ligand interaction detected (PLIP)

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 3 residues within 4Å: Chain A: I.110, L.113, R.114 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.114 Water bridges: A:E.45, A:E.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lukk, T. et al., Phosphoethanolamine N-methyl transferase is a Malarial drug target. To be Published

Release Date

2014-02-19

Peptides

Phosphoethanolamine N-methyltransferase, putative: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Phosphoethanolamine N-methyltransferase, putative

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