SMTL ID : 4ivv.1

Catalytic amidase domain of the major autolysin LytA from Streptococcus pneumaniae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.28, H.135, D.151 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.28, A:H.135, A:D.151, H2O.1, H2O.4

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: E.50, W.74, D.75, G.77, N.81 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.77, A:N.81 Water bridges: A:E.50, A:W.74, A:D.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mellroth, P. et al., Structural and functional insights into peptidoglycan access for the lytic amidase LytA of Streptococcus pneumoniae. MBio (2014)

Release Date

2014-01-29

Peptides

Autolysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Autolysin