SMTL ID : 4iwk.1

Crystal structure of iron soaked (overnight) ferritin from Pseudo-nitzschia multiseries

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-24-mer

Ligands

96 x FE: FE (III) ION(Non-covalent)

FE.1: 5 residues within 4Å: Chain A: E.16, E.49, H.52, N.98 Ligands: FE.3 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.16, A:E.49, A:H.52, H2O.5, H2O.5 FE.2: 4 residues within 4Å: Chain A: Y.41, E.45, K.134 Ligands: FE.4 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.45, H2O.5, H2O.6 FE.3: 7 residues within 4Å: Chain A: E.45, E.49, E.95, N.98, E.131 Ligands: FE.1, FE.4 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.49, A:E.95, A:E.131, H2O.5, H2O.6 FE.4: 5 residues within 4Å: Chain A: E.45, E.48, E.131 Ligands: FE.2, FE.3 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.45, A:E.48, A:E.131, H2O.5, H2O.6 FE.5: 4 residues within 4Å: Chain B: E.45, E.48, E.131 Ligands: FE.7 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.45, B:E.48, B:E.131, H2O.11, H2O.11 FE.6: 5 residues within 4Å: Chain B: E.16, E.49, H.52, N.98 Ligands: FE.7 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.16, B:E.49, B:H.52, H2O.11, H2O.11 FE.7: 7 residues within 4Å: Chain B: E.49, E.95, N.98, Q.128, E.131 Ligands: FE.5, FE.6 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.49, B:E.95, B:E.95, B:E.131, H2O.11 FE.8: 5 residues within 4Å: Chain C: E.16, E.49, H.52, N.98 Ligands: FE.9 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.16, C:E.49, C:H.52, H2O.17, H2O.17 FE.9: 6 residues within 4Å: Chain C: E.49, E.95, N.98, E.131 Ligands: FE.8, FE.10 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.49, C:E.95, C:E.131, H2O.17, H2O.17 FE.10: 5 residues within 4Å: Chain C: E.45, E.48, E.131 Ligands: FE.9, FE.11 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.45, C:E.48, C:E.131, H2O.17, H2O.17 FE.11: 3 residues within 4Å: Chain C: Y.41, E.45 Ligands: FE.10 3 PLIP interactions: 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.45, H2O.17, H2O.17 FE.12: 5 residues within 4Å: Chain D: E.16, E.49, H.52, N.98 Ligands: FE.15 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.16, D:E.49, D:H.52, H2O.23, H2O.23 FE.13: 6 residues within 4Å: Chain D: E.45, E.48, E.131 Ligands: FE.14, FE.15, FE.16 6 PLIP interactions: 3 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:E.45, D:E.48, D:E.131, H2O.23, H2O.23, H2O.23 FE.14: 4 residues within 4Å: Chain D: E.45, E.48 Ligands: FE.13, FE.16 2 PLIP interactions: 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:E.48, H2O.23 FE.15: 6 residues within 4Å: Chain D: E.49, E.95, N.98, E.131 Ligands: FE.12, FE.13 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.49, D:E.95, D:E.131, H2O.23, H2O.23 FE.16: 5 residues within 4Å: Chain D: Y.41, E.45, K.134 Ligands: FE.13, FE.14 2 PLIP interactions: 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:E.45, H2O.23 FE.17: 5 residues within 4Å: Chain E: E.16, E.49, H.52, N.98 Ligands: FE.18 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.16, E:E.49, E:H.52, H2O.29, H2O.29 FE.18: 6 residues within 4Å: Chain E: E.49, E.95, N.98, E.131 Ligands: FE.17, FE.19 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.49, E:E.95, E:E.131, H2O.29, H2O.29 FE.19: 5 residues within 4Å: Chain E: E.45, E.48, E.131 Ligands: FE.18, FE.20 5 PLIP interactions: 2 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:E.48, E:E.131, H2O.29, H2O.29, H2O.29 FE.20: 4 residues within 4Å: Chain E: E.45, E.48, Q.127 Ligands: FE.19 3 PLIP interactions: 1 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.48, H2O.29, H2O.29 FE.21: 5 residues within 4Å: Chain F: E.16, E.49, H.52, N.98 Ligands: FE.22 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.16, F:E.49, F:H.52, H2O.34, H2O.34 FE.22: 6 residues within 4Å: Chain F: E.49, E.95, N.98, E.131 Ligands: FE.21, FE.23 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.49, F:E.95, F:E.131, H2O.34, H2O.34 FE.23: 5 residues within 4Å: Chain F: E.45, E.48, E.131 Ligands: FE.22, FE.24 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.45, F:E.48, F:E.131, H2O.34, H2O.34 FE.24: 3 residues within 4Å: Chain F: Y.41, E.45 Ligands: FE.23 2 PLIP interactions: 1 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:E.45, H2O.34 FE.25: 5 residues within 4Å: Chain G: E.16, E.49, H.52, N.98 Ligands: FE.27 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.16, G:E.49, G:H.52, H2O.39, H2O.39 FE.26: 4 residues within 4Å: Chain G: Y.41, E.45, K.134 Ligands: FE.28 3 PLIP interactions: 1 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.45, H2O.39, H2O.39 FE.27: 7 residues within 4Å: Chain G: E.45, E.49, E.95, N.98, E.131 Ligands: FE.25, FE.28 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.49, G:E.95, G:E.131, H2O.39, H2O.39 FE.28: 5 residues within 4Å: Chain G: E.45, E.48, E.131 Ligands: FE.26, FE.27 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.45, G:E.48, G:E.131, H2O.39, H2O.39 FE.29: 4 residues within 4Å: Chain H: E.45, E.48, E.131 Ligands: FE.31 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:E.45, H:E.48, H:E.131, H2O.44, H2O.45 FE.30: 5 residues within 4Å: Chain H: E.16, E.49, H.52, N.98 Ligands: FE.31 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:E.16, H:E.49, H:H.52, H2O.45, H2O.45 FE.31: 7 residues within 4Å: Chain H: E.49, E.95, N.98, Q.128, E.131 Ligands: FE.29, FE.30 5 PLIP interactions: 4 interactions with chain H, 1 Ligand-Water interactions Metal complexes: H:E.49, H:E.95, H:E.95, H:E.131, H2O.44 FE.32: 5 residues within 4Å: Chain I: E.16, E.49, H.52, N.98 Ligands: FE.33 5 PLIP interactions: 3 interactions with chain I, 2 Ligand-Water interactions Metal complexes: I:E.16, I:E.49, I:H.52, H2O.50, H2O.51 FE.33: 6 residues within 4Å: Chain I: E.49, E.95, N.98, E.131 Ligands: FE.32, FE.34 5 PLIP interactions: 3 interactions with chain I, 2 Ligand-Water interactions Metal complexes: I:E.49, I:E.95, I:E.131, H2O.50, H2O.51 FE.34: 5 residues within 4Å: Chain I: E.45, E.48, E.131 Ligands: FE.33, FE.35 5 PLIP interactions: 3 interactions with chain I, 2 Ligand-Water interactions Metal complexes: I:E.45, I:E.48, I:E.131, H2O.50, H2O.51 FE.35: 3 residues within 4Å: Chain I: Y.41, E.45 Ligands: FE.34 3 PLIP interactions: 1 interactions with chain I, 2 Ligand-Water interactions Metal complexes: I:E.45, H2O.50, H2O.51 FE.36: 5 residues within 4Å: Chain J: E.16, E.49, H.52, N.98 Ligands: FE.39 5 PLIP interactions: 3 interactions with chain J, 2 Ligand-Water interactions Metal complexes: J:E.16, J:E.49, J:H.52, H2O.57, H2O.57 FE.37: 6 residues within 4Å: Chain J: E.45, E.48, E.131 Ligands: FE.38, FE.39, FE.40 6 PLIP interactions: 3 interactions with chain J, 3 Ligand-Water interactions Metal complexes: J:E.45, J:E.48, J:E.131, H2O.56, H2O.56, H2O.57 FE.38: 4 residues within 4Å: Chain J: E.45, E.48 Ligands: FE.37, FE.40 2 PLIP interactions: 1 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:E.48, H2O.56 FE.39: 6 residues within 4Å: Chain J: E.49, E.95, N.98, E.131 Ligands: FE.36, FE.37 5 PLIP interactions: 3 interactions with chain J, 2 Ligand-Water interactions Metal complexes: J:E.49, J:E.95, J:E.131, H2O.56, H2O.57 FE.40: 5 residues within 4Å: Chain J: Y.41, E.45, K.134 Ligands: FE.37, FE.38 2 PLIP interactions: 1 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:E.45, H2O.56 FE.41: 5 residues within 4Å: Chain K: E.16, E.49, H.52, N.98 Ligands: FE.42 5 PLIP interactions: 3 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:E.16, K:E.49, K:H.52, H2O.62, H2O.62 FE.42: 6 residues within 4Å: Chain K: E.49, E.95, N.98, E.131 Ligands: FE.41, FE.43 5 PLIP interactions: 3 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:E.49, K:E.95, K:E.131, H2O.62, H2O.62 FE.43: 5 residues within 4Å: Chain K: E.45, E.48, E.131 Ligands: FE.42, FE.44 5 PLIP interactions: 2 interactions with chain K, 3 Ligand-Water interactions Metal complexes: K:E.48, K:E.131, H2O.62, H2O.62, H2O.62 FE.44: 4 residues within 4Å: Chain K: E.45, E.48, Q.127 Ligands: FE.43 3 PLIP interactions: 1 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:E.48, H2O.62, H2O.62 FE.45: 5 residues within 4Å: Chain L: E.16, E.49, H.52, N.98 Ligands: FE.46 5 PLIP interactions: 3 interactions with chain L, 2 Ligand-Water interactions Metal complexes: L:E.16, L:E.49, L:H.52, H2O.67, H2O.68 FE.46: 6 residues within 4Å: Chain L: E.49, E.95, N.98, E.131 Ligands: FE.45, FE.47 5 PLIP interactions: 3 interactions with chain L, 2 Ligand-Water interactions Metal complexes: L:E.49, L:E.95, L:E.131, H2O.67, H2O.68 FE.47: 5 residues within 4Å: Chain L: E.45, E.48, E.131 Ligands: FE.46, FE.48 5 PLIP interactions: 3 interactions with chain L, 2 Ligand-Water interactions Metal complexes: L:E.45, L:E.48, L:E.131, H2O.67, H2O.67 FE.48: 3 residues within 4Å: Chain L: Y.41, E.45 Ligands: FE.47 2 PLIP interactions: 1 interactions with chain L, 1 Ligand-Water interactions Metal complexes: L:E.45, H2O.67 FE.49: 5 residues within 4Å: Chain M: E.16, E.49, H.52, N.98 Ligands: FE.51 5 PLIP interactions: 3 interactions with chain M, 2 Ligand-Water interactions Metal complexes: M:E.16, M:E.49, M:H.52, H2O.72, H2O.73 FE.50: 4 residues within 4Å: Chain M: Y.41, E.45, K.134 Ligands: FE.52 3 PLIP interactions: 1 interactions with chain M, 2 Ligand-Water interactions Metal complexes: M:E.45, H2O.72, H2O.73 FE.51: 7 residues within 4Å: Chain M: E.45, E.49, E.95, N.98, E.131 Ligands: FE.49, FE.52 5 PLIP interactions: 3 interactions with chain M, 2 Ligand-Water interactions Metal complexes: M:E.49, M:E.95, M:E.131, H2O.72, H2O.73 FE.52: 5 residues within 4Å: Chain M: E.45, E.48, E.131 Ligands: FE.50, FE.51 5 PLIP interactions: 3 interactions with chain M, 2 Ligand-Water interactions Metal complexes: M:E.45, M:E.48, M:E.131, H2O.72, H2O.73 FE.53: 4 residues within 4Å: Chain N: E.45, E.48, E.131 Ligands: FE.55 5 PLIP interactions: 3 interactions with chain N, 2 Ligand-Water interactions Metal complexes: N:E.45, N:E.48, N:E.131, H2O.78, H2O.78 FE.54: 5 residues within 4Å: Chain N: E.16, E.49, H.52, N.98 Ligands: FE.55 5 PLIP interactions: 3 interactions with chain N, 2 Ligand-Water interactions Metal complexes: N:E.16, N:E.49, N:H.52, H2O.78, H2O.78 FE.55: 7 residues within 4Å: Chain N: E.49, E.95, N.98, Q.128, E.131 Ligands: FE.53, FE.54 5 PLIP interactions: 4 interactions with chain N, 1 Ligand-Water interactions Metal complexes: N:E.49, N:E.95, N:E.95, N:E.131, H2O.78 FE.56: 5 residues within 4Å: Chain O: E.16, E.49, H.52, N.98 Ligands: FE.57 5 PLIP interactions: 3 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:E.16, O:E.49, O:H.52, H2O.84, H2O.84 FE.57: 6 residues within 4Å: Chain O: E.49, E.95, N.98, E.131 Ligands: FE.56, FE.58 5 PLIP interactions: 3 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:E.49, O:E.95, O:E.131, H2O.84, H2O.84 FE.58: 5 residues within 4Å: Chain O: E.45, E.48, E.131 Ligands: FE.57, FE.59 5 PLIP interactions: 3 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:E.45, O:E.48, O:E.131, H2O.84, H2O.84 FE.59: 3 residues within 4Å: Chain O: Y.41, E.45 Ligands: FE.58 3 PLIP interactions: 1 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:E.45, H2O.84, H2O.84 FE.60: 5 residues within 4Å: Chain P: E.16, E.49, H.52, N.98 Ligands: FE.63 5 PLIP interactions: 3 interactions with chain P, 2 Ligand-Water interactions Metal complexes: P:E.16, P:E.49, P:H.52, H2O.90, H2O.90 FE.61: 6 residues within 4Å: Chain P: E.45, E.48, E.131 Ligands: FE.62, FE.63, FE.64 6 PLIP interactions: 3 interactions with chain P, 3 Ligand-Water interactions Metal complexes: P:E.45, P:E.48, P:E.131, H2O.90, H2O.90, H2O.90 FE.62: 4 residues within 4Å: Chain P: E.45, E.48 Ligands: FE.61, FE.64 2 PLIP interactions: 1 interactions with chain P, 1 Ligand-Water interactions Metal complexes: P:E.48, H2O.90 FE.63: 6 residues within 4Å: Chain P: E.49, E.95, N.98, E.131 Ligands: FE.60, FE.61 5 PLIP interactions: 3 interactions with chain P, 2 Ligand-Water interactions Metal complexes: P:E.49, P:E.95, P:E.131, H2O.90, H2O.90 FE.64: 5 residues within 4Å: Chain P: Y.41, E.45, K.134 Ligands: FE.61, FE.62 2 PLIP interactions: 1 interactions with chain P, 1 Ligand-Water interactions Metal complexes: P:E.45, H2O.90 FE.65: 5 residues within 4Å: Chain Q: E.16, E.49, H.52, N.98 Ligands: FE.66 5 PLIP interactions: 3 interactions with chain Q, 2 Ligand-Water interactions Metal complexes: Q:E.16, Q:E.49, Q:H.52, H2O.96, H2O.96 FE.66: 6 residues within 4Å: Chain Q: E.49, E.95, N.98, E.131 Ligands: FE.65, FE.67 5 PLIP interactions: 3 interactions with chain Q, 2 Ligand-Water interactions Metal complexes: Q:E.49, Q:E.95, Q:E.131, H2O.96, H2O.96 FE.67: 5 residues within 4Å: Chain Q: E.45, E.48, E.131 Ligands: FE.66, FE.68 5 PLIP interactions: 2 interactions with chain Q, 3 Ligand-Water interactions Metal complexes: Q:E.48, Q:E.131, H2O.96, H2O.96, H2O.96 FE.68: 4 residues within 4Å: Chain Q: E.45, E.48, Q.127 Ligands: FE.67 3 PLIP interactions: 1 interactions with chain Q, 2 Ligand-Water interactions Metal complexes: Q:E.48, H2O.96, H2O.96 FE.69: 5 residues within 4Å: Chain R: E.16, E.49, H.52, N.98 Ligands: FE.70 5 PLIP interactions: 3 interactions with chain R, 2 Ligand-Water interactions Metal complexes: R:E.16, R:E.49, R:H.52, H2O.101, H2O.101 FE.70: 6 residues within 4Å: Chain R: E.49, E.95, N.98, E.131 Ligands: FE.69, FE.71 5 PLIP interactions: 3 interactions with chain R, 2 Ligand-Water interactions Metal complexes: R:E.49, R:E.95, R:E.131, H2O.101, H2O.101 FE.71: 5 residues within 4Å: Chain R: E.45, E.48, E.131 Ligands: FE.70, FE.72 5 PLIP interactions: 3 interactions with chain R, 2 Ligand-Water interactions Metal complexes: R:E.45, R:E.48, R:E.131, H2O.101, H2O.101 FE.72: 3 residues within 4Å: Chain R: Y.41, E.45 Ligands: FE.71 2 PLIP interactions: 1 interactions with chain R, 1 Ligand-Water interactions Metal complexes: R:E.45, H2O.101 FE.73: 5 residues within 4Å: Chain S: E.16, E.49, H.52, N.98 Ligands: FE.75 5 PLIP interactions: 3 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:E.16, S:E.49, S:H.52, H2O.106, H2O.106 FE.74: 4 residues within 4Å: Chain S: Y.41, E.45, K.134 Ligands: FE.76 3 PLIP interactions: 1 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:E.45, H2O.106, H2O.106 FE.75: 7 residues within 4Å: Chain S: E.45, E.49, E.95, N.98, E.131 Ligands: FE.73, FE.76 5 PLIP interactions: 3 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:E.49, S:E.95, S:E.131, H2O.106, H2O.106 FE.76: 5 residues within 4Å: Chain S: E.45, E.48, E.131 Ligands: FE.74, FE.75 5 PLIP interactions: 3 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:E.45, S:E.48, S:E.131, H2O.106, H2O.106 FE.77: 4 residues within 4Å: Chain T: E.45, E.48, E.131 Ligands: FE.79 5 PLIP interactions: 3 interactions with chain T, 2 Ligand-Water interactions Metal complexes: T:E.45, T:E.48, T:E.131, H2O.111, H2O.112 FE.78: 5 residues within 4Å: Chain T: E.16, E.49, H.52, N.98 Ligands: FE.79 5 PLIP interactions: 3 interactions with chain T, 2 Ligand-Water interactions Metal complexes: T:E.16, T:E.49, T:H.52, H2O.112, H2O.112 FE.79: 7 residues within 4Å: Chain T: E.49, E.95, N.98, Q.128, E.131 Ligands: FE.77, FE.78 5 PLIP interactions: 4 interactions with chain T, 1 Ligand-Water interactions Metal complexes: T:E.49, T:E.95, T:E.95, T:E.131, H2O.111 FE.80: 5 residues within 4Å: Chain U: E.16, E.49, H.52, N.98 Ligands: FE.81 5 PLIP interactions: 3 interactions with chain U, 2 Ligand-Water interactions Metal complexes: U:E.16, U:E.49, U:H.52, H2O.117, H2O.118 FE.81: 6 residues within 4Å: Chain U: E.49, E.95, N.98, E.131 Ligands: FE.80, FE.82 5 PLIP interactions: 3 interactions with chain U, 2 Ligand-Water interactions Metal complexes: U:E.49, U:E.95, U:E.131, H2O.117, H2O.118 FE.82: 5 residues within 4Å: Chain U: E.45, E.48, E.131 Ligands: FE.81, FE.83 5 PLIP interactions: 3 interactions with chain U, 2 Ligand-Water interactions Metal complexes: U:E.45, U:E.48, U:E.131, H2O.117, H2O.118 FE.83: 3 residues within 4Å: Chain U: Y.41, E.45 Ligands: FE.82 3 PLIP interactions: 1 interactions with chain U, 2 Ligand-Water interactions Metal complexes: U:E.45, H2O.117, H2O.118 FE.84: 5 residues within 4Å: Chain V: E.16, E.49, H.52, N.98 Ligands: FE.87 5 PLIP interactions: 3 interactions with chain V, 2 Ligand-Water interactions Metal complexes: V:E.16, V:E.49, V:H.52, H2O.124, H2O.124 FE.85: 6 residues within 4Å: Chain V: E.45, E.48, E.131 Ligands: FE.86, FE.87, FE.88 6 PLIP interactions: 3 interactions with chain V, 3 Ligand-Water interactions Metal complexes: V:E.45, V:E.48, V:E.131, H2O.123, H2O.124, H2O.124 FE.86: 4 residues within 4Å: Chain V: E.45, E.48 Ligands: FE.85, FE.88 2 PLIP interactions: 1 interactions with chain V, 1 Ligand-Water interactions Metal complexes: V:E.48, H2O.124 FE.87: 6 residues within 4Å: Chain V: E.49, E.95, N.98, E.131 Ligands: FE.84, FE.85 5 PLIP interactions: 3 interactions with chain V, 2 Ligand-Water interactions Metal complexes: V:E.49, V:E.95, V:E.131, H2O.123, H2O.124 FE.88: 5 residues within 4Å: Chain V: Y.41, E.45, K.134 Ligands: FE.85, FE.86 2 PLIP interactions: 1 interactions with chain V, 1 Ligand-Water interactions Metal complexes: V:E.45, H2O.124 FE.89: 5 residues within 4Å: Chain W: E.16, E.49, H.52, N.98 Ligands: FE.90 5 PLIP interactions: 3 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:E.16, W:E.49, W:H.52, H2O.129, H2O.129 FE.90: 6 residues within 4Å: Chain W: E.49, E.95, N.98, E.131 Ligands: FE.89, FE.91 5 PLIP interactions: 3 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:E.49, W:E.95, W:E.131, H2O.129, H2O.129 FE.91: 5 residues within 4Å: Chain W: E.45, E.48, E.131 Ligands: FE.90, FE.92 5 PLIP interactions: 2 interactions with chain W, 3 Ligand-Water interactions Metal complexes: W:E.48, W:E.131, H2O.129, H2O.129, H2O.130 FE.92: 4 residues within 4Å: Chain W: E.45, E.48, Q.127 Ligands: FE.91 3 PLIP interactions: 1 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:E.48, H2O.129, H2O.129 FE.93: 5 residues within 4Å: Chain X: E.16, E.49, H.52, N.98 Ligands: FE.94 5 PLIP interactions: 3 interactions with chain X, 2 Ligand-Water interactions Metal complexes: X:E.16, X:E.49, X:H.52, H2O.135, H2O.135 FE.94: 6 residues within 4Å: Chain X: E.49, E.95, N.98, E.131 Ligands: FE.93, FE.95 5 PLIP interactions: 3 interactions with chain X, 2 Ligand-Water interactions Metal complexes: X:E.49, X:E.95, X:E.131, H2O.134, H2O.135 FE.95: 5 residues within 4Å: Chain X: E.45, E.48, E.131 Ligands: FE.94, FE.96 5 PLIP interactions: 3 interactions with chain X, 2 Ligand-Water interactions Metal complexes: X:E.45, X:E.48, X:E.131, H2O.134, H2O.135 FE.96: 3 residues within 4Å: Chain X: Y.41, E.45 Ligands: FE.95 2 PLIP interactions: 1 interactions with chain X, 1 Ligand-Water interactions Metal complexes: X:E.45, H2O.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pfaffen, S. et al., Mechanism of ferrous iron binding and oxidation by ferritin from a pennate diatom. J.Biol.Chem. (2013)

Release Date

2013-03-20

Peptides

Ferritin: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
A

H
B

I
C

J
D

K
E

L
F

M
A

N
B

O
C

P
D

Q
E

R
F

S
A

T
B

U
C

V
D

W
E

X
F

Ferritin

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