SMTL ID : 4ixn.1 (1 other biounit)

Crystal Structure of Zn(II)-bound E37A,C66A,C67A triple mutant YjiA GTPase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: E.74, H.114 Chain B: E.74, H.114 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Metal complexes: B:E.74, B:E.74, B:H.114, A:E.74, A:H.114 ZN.2: 2 residues within 4Å: Chain A: E.167, H.170 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.167, A:H.170 ZN.3: 1 residues within 4Å: Chain A: H.187 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.187

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 2 residues within 4Å: Chain A: H.114, E.115 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.115 Water bridges: A:V.116 Salt bridges: A:H.114 SO4.5: 2 residues within 4Å: Chain B: H.114, E.115 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:E.115 Water bridges: B:V.116, A:R.53 Salt bridges: B:H.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sydor, A.M. et al., Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases. Biochemistry (2013)

Release Date

2013-02-27

Peptides

Uncharacterized GTP-binding protein YjiA: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized GTP-binding protein YjiA

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