SMTL ID : 4j0m.2 (1 other biounit)

Crystal structure of BRL1 (LRR) in complex with brassinolide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: N.509, S.532, N.533, N.534, R.572 Ligands: NAG.8 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.572 NAG-NAG.2: 2 residues within 4Å: Chain A: N.338, E.586 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.586 NAG-NAG.4: 8 residues within 4Å: Chain A: S.109, S.110, N.133, S.135, N.136, T.155, D.157, Y.181 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.136 NAG-NAG.5: 2 residues within 4Å: Chain A: G.202, N.203 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG-BMA-MAN-MAN-MAN.3: 15 residues within 4Å: Chain A: S.210, Q.211, N.233, S.235, R.236, Q.257, S.259, A.261, H.262, I.282, D.284, S.286, N.306, N.308, Y.333 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.236, A:D.284, A:D.284, A:N.306, A:N.306, A:N.308, A:Y.333 Water bridges: A:Y.333

1 x BLD: Brassinolide(Non-covalent)

BLD.6: 14 residues within 4Å: Chain A: I.503, I.526, W.527, F.560, F.562, R.564, L.577, Y.603, T.607, M.608, Q.642, V.643, G.666, V.667 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.503, A:I.526, A:W.527, A:W.527, A:F.560, A:F.562, A:L.577, A:T.607, A:V.643 Hydrogen bonds: A:M.608, A:M.608 Salt bridges: A:R.564

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.7: 5 residues within 4Å: Chain A: N.20, S.21, T.68, N.70, N.73 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:T.68, A:N.70 Hydrogen bonds: A:N.73 Water bridges: A:N.70 NAG.8: 9 residues within 4Å: Chain A: N.460, S.484, R.486, N.508, G.573, A.574, P.592, M.593 Ligands: NAG-NAG.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.460, A:S.484, A:R.486, A:N.508

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

She, J. et al., Structural basis for differential recognition of brassinolide by its receptors. Protein Cell (2013)

Release Date

2013-07-24

Peptides

Serine/threonine-protein kinase BRI1-like 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Serine/threonine-protein kinase BRI1-like 1

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