- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.24 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.1: 7 residues within 4Å:- Chain A: R.83, A.84, Q.102, I.133
- Chain B: D.281, P.484
- Ligands: GOL.7
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:R.83, A:R.85, A:R.85, A:Q.102, B:D.281
- Water bridges: B:D.281
GOL.2: 8 residues within 4Å:- Chain A: I.51, S.52, M.54, V.164, I.165, S.166, L.167
- Chain B: D.454
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.52, A:S.52, A:L.167
GOL.3: 8 residues within 4Å:- Chain A: Q.219, E.494, T.509, S.510, M.511, F.512
- Chain B: Q.239, P.241
6 PLIP interactions:1 interactions with chain B, 5 interactions with chain A- Hydrogen bonds: B:Q.239, A:Q.219, A:E.494, A:E.494, A:M.511, A:F.512
GOL.4: 4 residues within 4Å:- Chain A: K.60
- Chain B: H.320, R.365
- Ligands: GOL.5
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:R.365
GOL.5: 4 residues within 4Å:- Chain A: Q.58, K.60
- Chain B: R.428
- Ligands: GOL.4
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:R.428, A:Q.58, A:K.60
GOL.6: 6 residues within 4Å:- Chain A: H.224, R.227, E.228, I.231
- Chain B: H.224, R.227
5 PLIP interactions:1 interactions with chain B, 4 interactions with chain A- Hydrogen bonds: B:R.227, A:H.224
- Water bridges: A:R.227, A:E.237, A:E.237
GOL.7: 7 residues within 4Å:- Chain A: R.83, Q.102
- Chain B: A.314, F.315, N.316, P.484
- Ligands: GOL.1
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:R.83, A:Q.102, B:A.314
- Water bridges: A:R.83, A:R.83
GOL.8: 6 residues within 4Å:- Chain A: Y.317
- Chain B: S.52, R.63, D.135, Y.163, I.165
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:Y.317, B:R.63, B:R.63, B:D.135
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, K.R. et al., Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex. Proteins (2013)
- Release Date
- 2013-05-15
- Peptides
- Aspartate--tRNA ligase, cytoplasmic: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.24 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, K.R. et al., Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex. Proteins (2013)
- Release Date
- 2013-05-15
- Peptides
- Aspartate--tRNA ligase, cytoplasmic: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B