SMTL ID : 4j3h.1

Ring cycle for dilating and constricting the nuclear pore: structure of a Nup54 homo-tetramer.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-tetramer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: D.39, D.42 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.39, A:D.39, A:D.42 CA.2: 1 residues within 4Å: Chain A: D.11 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.11, A:D.11, H2O.1, H2O.1, H2O.2 CA.3: 3 residues within 4Å: Chain B: I.35, D.38, D.39 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:I.35, B:D.38, B:D.39, H2O.2 CA.4: 2 residues within 4Å: Chain C: D.39, D.42 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:D.39, C:D.39, C:D.42 CA.5: 1 residues within 4Å: Chain C: D.11 5 PLIP interactions: 2 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:D.11, C:D.11, H2O.4, H2O.4, H2O.5 CA.6: 3 residues within 4Å: Chain D: I.35, D.38, D.39 4 PLIP interactions: 3 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:I.35, D:D.38, D:D.39, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Solmaz, S.R. et al., Ring cycle for dilating and constricting the nuclear pore. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-04-10

Peptides

Nuclear pore complex protein Nup54: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Nuclear pore complex protein Nup54