SMTL ID : 4j5x.1

Crystal Structure of the SR12813-bound PXR/RXRalpha LBD Heterotetramer Complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-2-2-mer

Ligands

2 x SRL: [2-(3,5-DI-TERT-BUTYL-4-HYDROXY-PHENYL)-1-(DIETHOXY-PHOSPHORYL)-VINYL]-PHOSPHONIC ACID DIETHLYL ESTER(Non-covalent)

SRL.1: 17 residues within 4Å: Chain C: L.80, L.83, L.114, M.117, M.120, S.121, Q.159, F.162, W.173, Y.180, M.197, H.201, H.281, R.284, L.285, I.288, M.299 10 PLIP interactions: 10 interactions with chain C Hydrophobic interactions: C:L.80, C:L.114, C:M.120, C:F.162, C:W.173, C:Y.180, C:R.284, C:L.285 Hydrogen bonds: C:Q.159 pi-Stacking: C:H.281 SRL.2: 13 residues within 4Å: Chain D: L.83, V.85, M.117, S.121, Q.159, F.162, W.173, Y.180, M.197, L.198, H.201, H.281, M.299 10 PLIP interactions: 10 interactions with chain D Hydrophobic interactions: D:L.83, D:V.85, D:F.162, D:W.173, D:W.173, D:W.173, D:Y.180, D:L.198, D:H.281 Hydrogen bonds: D:Q.159

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wallace, B.D. et al., Structural and Functional Analysis of the Human Nuclear Xenobiotic Receptor PXR in Complex with RXRalpha. J.Mol.Biol. (2013)

Release Date

2013-08-21

Peptides

Retinoic acid receptor RXR-alpha, Nuclear receptor coactivator 1: AB
Nuclear receptor subfamily 1 group I member 2, Nuclear receptor coactivator 1: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

C
A

D
B

Retinoic acid receptor RXR-alpha, Nuclear receptor coactivator 1

Nuclear receptor subfamily 1 group I member 2, Nuclear receptor coactivator 1

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