SMTL ID : 4j7q.1 (2 other biounits)

Crystal structure of Saccharomyces cerevisiae Sfh3 complexed with phosphatidylinositol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x B7N: (1R)-2-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate(Non-covalent)

B7N.1: 20 residues within 4Å: Chain A: A.84, R.95, Q.153, Q.161, L.165, L.169, L.183, L.185, F.189, V.213, L.217, Q.218, Y.221, P.222, E.223, R.224, L.225, L.230, A.237, K.255 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:Q.161, A:Q.161, A:L.165, A:L.183, A:F.189, A:V.213, A:L.217, A:L.217, A:Y.221, A:R.224, A:L.230, A:A.237 Hydrogen bonds: A:R.95, A:R.95, A:Q.218, A:Y.221, A:E.223, A:E.223, A:R.224, A:L.225 Water bridges: A:L.217, A:Q.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, H. et al., Structural determinants for phosphatidylinositol recognition by Sfh3 and substrate-induced dimer-monomer transition during lipid transfer cycles. Febs Lett. (2013)

Release Date

2013-07-03

Peptides

Phosphatidylinositol transfer protein PDR16: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphatidylinositol transfer protein PDR16

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