- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- homo-12-mer
- Ligands
- 12 x NI: NICKEL (II) ION(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 9 residues within 4Å:- Chain A: R.54, S.106, A.107, Q.108
- Chain C: R.54, S.106, A.107, Q.108
- Ligands: SO4.8
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain C- Hydrogen bonds: A:A.107, A:Q.108, C:A.107, C:Q.108
- Salt bridges: A:R.54
SO4.5: 9 residues within 4Å:- Chain B: R.54, S.106, A.107, Q.108
- Chain D: R.54, S.106, A.107, Q.108
- Ligands: SO4.11
5 PLIP interactions:2 interactions with chain D, 3 interactions with chain B- Hydrogen bonds: D:A.107, D:Q.108, B:A.107, B:Q.108
- Salt bridges: B:R.54
SO4.8: 9 residues within 4Å:- Chain A: R.54, S.106, A.107, Q.108
- Chain C: R.54, S.106, A.107, Q.108
- Ligands: SO4.2
5 PLIP interactions:3 interactions with chain C, 2 interactions with chain A- Hydrogen bonds: C:A.107, C:Q.108, A:A.107, A:Q.108
- Salt bridges: C:R.54
SO4.11: 9 residues within 4Å:- Chain B: R.54, S.106, A.107, Q.108
- Chain D: R.54, S.106, A.107, Q.108
- Ligands: SO4.5
5 PLIP interactions:3 interactions with chain D, 2 interactions with chain B- Hydrogen bonds: D:A.107, D:Q.108, B:A.107, B:Q.108
- Salt bridges: D:R.54
SO4.14: 9 residues within 4Å:- Chain E: R.54, S.106, A.107, Q.108
- Chain G: R.54, S.106, A.107, Q.108
- Ligands: SO4.20
6 PLIP interactions:2 interactions with chain G, 4 interactions with chain E- Hydrogen bonds: G:A.107, G:Q.108, E:S.106, E:A.107, E:Q.108
- Salt bridges: E:R.54
SO4.17: 9 residues within 4Å:- Chain F: R.54, S.106, A.107, Q.108
- Chain H: R.54, S.106, A.107, Q.108
- Ligands: SO4.23
5 PLIP interactions:2 interactions with chain H, 3 interactions with chain F- Hydrogen bonds: H:A.107, H:Q.108, F:A.107, F:Q.108
- Salt bridges: F:R.54
SO4.20: 9 residues within 4Å:- Chain E: R.54, S.106, A.107, Q.108
- Chain G: R.54, S.106, A.107, Q.108
- Ligands: SO4.14
6 PLIP interactions:2 interactions with chain E, 4 interactions with chain G- Hydrogen bonds: E:A.107, E:Q.108, G:S.106, G:A.107, G:Q.108
- Salt bridges: G:R.54
SO4.23: 9 residues within 4Å:- Chain F: R.54, S.106, A.107, Q.108
- Chain H: R.54, S.106, A.107, Q.108
- Ligands: SO4.17
5 PLIP interactions:3 interactions with chain H, 2 interactions with chain F- Hydrogen bonds: H:A.107, H:Q.108, F:A.107, F:Q.108
- Salt bridges: H:R.54
SO4.26: 9 residues within 4Å:- Chain I: R.54, S.106, A.107, Q.108
- Chain K: R.54, S.106, A.107, Q.108
- Ligands: SO4.32
6 PLIP interactions:4 interactions with chain I, 2 interactions with chain K- Hydrogen bonds: I:S.106, I:A.107, I:Q.108, K:A.107, K:Q.108
- Salt bridges: I:R.54
SO4.29: 9 residues within 4Å:- Chain J: R.54, S.106, A.107, Q.108
- Chain L: R.54, S.106, A.107, Q.108
- Ligands: SO4.35
6 PLIP interactions:2 interactions with chain L, 4 interactions with chain J- Hydrogen bonds: L:A.107, L:Q.108, J:S.106, J:A.107, J:Q.108
- Salt bridges: J:R.54
SO4.32: 9 residues within 4Å:- Chain I: R.54, S.106, A.107, Q.108
- Chain K: R.54, S.106, A.107, Q.108
- Ligands: SO4.26
6 PLIP interactions:2 interactions with chain I, 4 interactions with chain K- Hydrogen bonds: I:A.107, I:Q.108, K:S.106, K:A.107, K:Q.108
- Salt bridges: K:R.54
SO4.35: 9 residues within 4Å:- Chain J: R.54, S.106, A.107, Q.108
- Chain L: R.54, S.106, A.107, Q.108
- Ligands: SO4.29
6 PLIP interactions:4 interactions with chain L, 2 interactions with chain J- Hydrogen bonds: L:S.106, L:A.107, L:Q.108, J:A.107, J:Q.108
- Salt bridges: L:R.54
- 12 x 1JO: D-gamma-glutamyl-S-(4-phenylbutyl)-L-cysteinylglycine(Non-covalent)
1JO.3: 18 residues within 4Å:- Chain A: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
- Chain J: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
15 PLIP interactions:11 interactions with chain A, 4 interactions with chain J- Hydrophobic interactions: A:Y.65, A:Y.65, A:L.68, A:L.121, A:W.122, J:V.22, J:A.26, J:L.30
- Hydrogen bonds: A:N.61, A:E.64, A:Y.65
- Salt bridges: A:R.110, J:R.36
- pi-Stacking: A:W.122, A:W.122
1JO.6: 18 residues within 4Å:- Chain B: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
- Chain K: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
15 PLIP interactions:11 interactions with chain B, 4 interactions with chain K- Hydrophobic interactions: B:Y.65, B:Y.65, B:L.68, B:L.121, B:W.122, K:V.22, K:A.26, K:L.30
- Hydrogen bonds: B:N.61, B:E.64, B:Y.65
- Salt bridges: B:R.110, K:R.36
- pi-Stacking: B:W.122, B:W.122
1JO.9: 18 residues within 4Å:- Chain C: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
- Chain I: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
15 PLIP interactions:11 interactions with chain C, 4 interactions with chain I- Hydrophobic interactions: C:Y.65, C:Y.65, C:L.68, C:L.121, C:W.122, I:V.22, I:A.26, I:L.30
- Hydrogen bonds: C:N.61, C:E.64, C:Y.99
- Salt bridges: C:R.110, I:R.36
- pi-Stacking: C:W.122, C:W.122
1JO.12: 18 residues within 4Å:- Chain D: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
- Chain L: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
15 PLIP interactions:4 interactions with chain L, 11 interactions with chain D- Hydrophobic interactions: L:V.22, L:A.26, L:L.30, D:Y.65, D:Y.65, D:L.68, D:L.121, D:W.122
- Salt bridges: L:R.36, D:R.110
- Hydrogen bonds: D:N.61, D:E.64, D:Y.99
- pi-Stacking: D:W.122, D:W.122
1JO.15: 18 residues within 4Å:- Chain B: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
- Chain E: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
15 PLIP interactions:11 interactions with chain E, 4 interactions with chain B- Hydrophobic interactions: E:Y.65, E:Y.65, E:L.68, E:L.121, E:W.122, B:V.22, B:A.26, B:L.30
- Hydrogen bonds: E:N.61, E:E.64, E:Y.99
- Salt bridges: E:R.110, B:R.36
- pi-Stacking: E:W.122, E:W.122
1JO.18: 18 residues within 4Å:- Chain C: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
- Chain F: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
15 PLIP interactions:11 interactions with chain F, 4 interactions with chain C- Hydrophobic interactions: F:Y.65, F:Y.65, F:L.68, F:L.121, F:W.122, C:V.22, C:A.26, C:L.30
- Hydrogen bonds: F:N.61, F:E.64, F:Y.65
- Salt bridges: F:R.110, C:R.36
- pi-Stacking: F:W.122, F:W.122
1JO.21: 18 residues within 4Å:- Chain A: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
- Chain G: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
15 PLIP interactions:11 interactions with chain G, 4 interactions with chain A- Hydrophobic interactions: G:Y.65, G:Y.65, G:L.68, G:L.121, G:W.122, A:V.22, A:A.26, A:L.30
- Hydrogen bonds: G:N.61, G:E.64, G:Y.99
- Salt bridges: G:R.110, A:R.36
- pi-Stacking: G:W.122, G:W.122
1JO.24: 18 residues within 4Å:- Chain D: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
- Chain H: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
15 PLIP interactions:4 interactions with chain D, 11 interactions with chain H- Hydrophobic interactions: D:V.22, D:A.26, D:L.30, H:Y.65, H:Y.65, H:L.68, H:L.121, H:W.122
- Salt bridges: D:R.36, H:R.110
- Hydrogen bonds: H:N.61, H:E.64, H:Y.65
- pi-Stacking: H:W.122, H:W.122
1JO.27: 18 residues within 4Å:- Chain F: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
- Chain I: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
15 PLIP interactions:11 interactions with chain I, 4 interactions with chain F- Hydrophobic interactions: I:Y.65, I:Y.65, I:L.68, I:L.121, I:W.122, F:V.22, F:A.26, F:L.30
- Hydrogen bonds: I:N.61, I:E.64, I:Y.65
- Salt bridges: I:R.110, F:R.36
- pi-Stacking: I:W.122, I:W.122
1JO.30: 18 residues within 4Å:- Chain G: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
- Chain J: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
15 PLIP interactions:11 interactions with chain J, 4 interactions with chain G- Hydrophobic interactions: J:Y.65, J:Y.65, J:L.68, J:L.121, J:W.122, G:V.22, G:A.26, G:L.30
- Hydrogen bonds: J:N.61, J:E.64, J:Y.99
- Salt bridges: J:R.110, G:R.36
- pi-Stacking: J:W.122, J:W.122
1JO.33: 18 residues within 4Å:- Chain E: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
- Chain K: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
15 PLIP interactions:4 interactions with chain E, 11 interactions with chain K- Hydrophobic interactions: E:V.22, E:A.26, E:L.30, K:Y.65, K:Y.65, K:L.68, K:L.121, K:W.122
- Salt bridges: E:R.36, K:R.110
- Hydrogen bonds: K:N.61, K:E.64, K:Y.99
- pi-Stacking: K:W.122, K:W.122
1JO.36: 18 residues within 4Å:- Chain H: V.22, A.26, S.29, L.30, V.32, I.33, R.36, Y.56, Q.59
- Chain L: N.61, E.64, Y.65, L.68, Y.99, R.110, L.114, L.121, W.122
15 PLIP interactions:11 interactions with chain L, 4 interactions with chain H- Hydrophobic interactions: L:Y.65, L:Y.65, L:L.68, L:L.121, L:W.122, H:V.22, H:A.26, H:L.30
- Hydrogen bonds: L:N.61, L:E.64, L:Y.65
- Salt bridges: L:R.110, H:R.36
- pi-Stacking: L:W.122, L:W.122
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Niegowski, D. et al., Crystal Structures of Leukotriene C4 Synthase in Complex with Product Analogs: IMPLICATIONS FOR THE ENZYME MECHANISM. J.Biol.Chem. (2014)
- Release Date
- 2014-01-01
- Peptides
- Leukotriene C4 synthase: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- homo-12-mer
- Ligands
- 12 x NI: NICKEL (II) ION(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 12 x 1JO: D-gamma-glutamyl-S-(4-phenylbutyl)-L-cysteinylglycine(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Niegowski, D. et al., Crystal Structures of Leukotriene C4 Synthase in Complex with Product Analogs: IMPLICATIONS FOR THE ENZYME MECHANISM. J.Biol.Chem. (2014)
- Release Date
- 2014-01-01
- Peptides
- Leukotriene C4 synthase: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
A