SMTL ID : 4j86.2 (1 other biounit)

Crystal structure of beta'-COP/yWbp1 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

1 x THR- PHE- LYS- LYS- THR- ASN: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1(Non-covalent)

THR-PHE-LYS-LYS-THR-ASN.1: 14 residues within 4Å: Chain A: R.15, K.17, Y.33, R.59, D.98, Y.99, R.101, D.117, F.142, L.161, N.188, D.206, R.272, W.274 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:Y.99, A:F.142, A:W.274 Hydrogen bonds: A:R.59, A:R.59, A:D.98, A:R.101, A:R.101, A:N.188, A:N.188, A:R.272 Water bridges: A:R.15, A:R.15, A:K.17, A:E.248, A:E.248, A:E.248 Salt bridges: A:R.15, A:K.17, A:R.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ma, W. et al., Rules for the recognition of dilysine retrieval motifs by coatomer. Embo J. (2013)

Release Date

2013-03-27

Peptides

Coatomer subunit beta': A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Coatomer subunit beta'

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