SMTL ID : 4j9x.1

Crystal structure of the complex of a hydroxyproline epimerase (TARGET EFI-506499, PSEUDOMONAS FLUORESCENS PF-5) with trans-4-hydroxy-l-proline

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x HYP: 4-HYDROXYPROLINE(Non-covalent)

HYP.1: 11 residues within 4Å: Chain A: E.36, L.107, C.110, G.111, H.112, H.230, C.248, D.254, C.258, G.259, T.260 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.111, A:H.112, A:H.112, A:H.230, A:D.254, A:G.259, A:T.260, A:T.260 Salt bridges: A:H.112 HYP.3: 11 residues within 4Å: Chain B: E.36, L.107, C.110, G.111, H.112, H.230, C.248, D.254, C.258, G.259, T.260 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:G.111, B:H.112, B:H.112, B:H.230, B:D.254, B:G.259, B:T.260, B:T.260 Salt bridges: B:H.112

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: D.237, A.240 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.237, A:D.237 NA.4: 2 residues within 4Å: Chain B: D.237, A.240 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.237, B:D.237

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Crystal structure of the complex of a hydroxyproline epimerase (TARGET EFI-506499, PSEUDOMONAS FLUORESCENS PF-5) with trans-4-hydroxy-l-proline. To be Published

Release Date

2013-03-13

Peptides

Proline racemase family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Proline racemase family protein

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