SMTL ID : 4jbr.1

tRNA-guanine transglycosylase Y330C mutant as covalently linked dimer in space group P6(5)22

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.92 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.320, C.322, C.325, H.351 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.320, A:C.322, A:C.325, A:H.351 ZN.3: 4 residues within 4Å: Chain B: C.320, C.322, C.325, H.351 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.320, B:C.322, B:C.325, B:H.351

2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 8 residues within 4Å: Chain A: G.48, T.49, A.51, L.56, P.58, V.61, I.69, M.95 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.50, A:A.51 DMS.4: 8 residues within 4Å: Chain B: G.48, T.49, A.51, L.56, P.58, V.61, I.69, M.95 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:A.50, B:A.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, D. et al., Targeting a Cryptic Pocket in a Protein-Protein Contact by Disulfide-Induced Rupture of a Homodimeric Interface. Acs Chem.Biol. (2021)

Release Date

2014-03-19

Peptides

tRNA-guanine transglycosylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

tRNA-guanine transglycosylase

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