SMTL ID : 4jdf.1

Crystal structure of a PotF mutant complexed with spermidine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x SPD: SPERMIDINE(Non-covalent)

SPD.1: 9 residues within 4Å: Chain A: W.12, T.13, E.14, Y.15, E.160, W.219, W.251, D.253, Y.289 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.12, A:Y.15, A:W.219, A:W.219 Hydrogen bonds: A:W.12, A:E.14, A:E.160, A:E.160 Water bridges: A:T.13, A:D.157, A:Q.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scheib, U. et al., Change in protein-ligand specificity through binding pocket grafting. J.Struct.Biol. (2014)

Release Date

2013-07-10

Peptides

Putrescine-binding periplasmic protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putrescine-binding periplasmic protein