SMTL ID : 4jgx.1

The Structure of Sterol Carrier Protein 2 from the Yeast Yarrowia Lipolytica

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 4 residues within 4Å: Chain A: S.2, L.3, R.18, K.67 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.3 Salt bridges: A:R.18 CIT.3: 1 residues within 4Å: Chain B: R.99 3 PLIP interactions: 3 interactions with chain B Salt bridges: B:R.99, B:R.99, B:R.99

2 x PLM: PALMITIC ACID(Non-covalent)

PLM.2: 8 residues within 4Å: Chain A: I.17, F.43, L.90, V.91, A.97, V.108, I.118, E.119 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.17, A:F.43, A:L.90, A:V.91, A:A.97, A:V.108, A:E.119, A:E.119 PLM.4: 14 residues within 4Å: Chain A: M.113 Chain B: L.90, V.91, G.93, A.97, F.101, L.106, V.112, A.115, A.116, I.118, E.119, L.122, K.123 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:A.97, B:L.106, B:A.115, B:I.118, B:L.122, B:K.123 Hydrogen bonds: B:V.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Berti, F.P. et al., The crystal structure of sterol carrier protein 2 from Yarrowia lipolytica and the evolutionary conservation of a large, non-specific lipid-binding cavity. J.Struct.Funct.Genom. (2013)

Release Date

2013-12-18

Peptides

Fatty acid-binding protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fatty acid-binding protein

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