- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.99 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x B6F: [(1,2,3,4,5-eta)-cyclopentadienyl][(1,2,3,4,5-eta)-{6-[(6-{[5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanoyl]amino}hexanoyl)amino]hexanoyl}cyclopentadienyl]iron(Non-covalent)
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.2: 4 residues within 4Å:- Chain A: G.15, N.17, T.34, L.123
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:T.34
- Hydrogen bonds: A:G.15
NAG.4: 7 residues within 4Å:- Chain B: G.15, N.17, T.34, T.35, A.36, I.44, L.123
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:I.44
- Hydrogen bonds: B:G.15, B:N.17
NAG.6: 4 residues within 4Å:- Chain C: G.15, N.17, T.34, L.123
2 PLIP interactions:2 interactions with chain C- Hydrophobic interactions: C:T.34
- Hydrogen bonds: C:G.15
NAG.8: 7 residues within 4Å:- Chain D: G.15, N.17, T.34, T.35, A.36, I.44, L.123
3 PLIP interactions:3 interactions with chain D- Hydrophobic interactions: D:I.44
- Hydrogen bonds: D:G.15, D:N.17
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Plazuk, D. et al., Ferrocene-Biotin Conjugates Targeting Cancer Cells: Synthesis, Interaction with Avidin, Cytotoxic Properties and the Crystal Structure of the Complex of Avidin with a Biotin-Linker-Ferrocene Conjugate. Organometallics (2013)
- Release Date
- 2013-11-20
- Peptides
- Avidin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.99 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x B6F: [(1,2,3,4,5-eta)-cyclopentadienyl][(1,2,3,4,5-eta)-{6-[(6-{[5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanoyl]amino}hexanoyl)amino]hexanoyl}cyclopentadienyl]iron(Non-covalent)
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Plazuk, D. et al., Ferrocene-Biotin Conjugates Targeting Cancer Cells: Synthesis, Interaction with Avidin, Cytotoxic Properties and the Crystal Structure of the Complex of Avidin with a Biotin-Linker-Ferrocene Conjugate. Organometallics (2013)
- Release Date
- 2013-11-20
- Peptides
- Avidin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B