SMTL ID : 4jih.1

Crystal Structure Of AKR1B10 Complexed With NADP+ And Epalrestat

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x EPR: {5-[(2E)-2-methyl-3-phenylprop-2-en-1-ylidene]-4-oxo-2-thioxo-1,3-thiazolidin-3-yl}acetic acid(Non-covalent)

EPR.1: 11 residues within 4Å: Chain A: W.23, V.50, Y.51, W.82, H.113, F.125, W.222, C.301, V.303, L.304 Ligands: NAP.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.125, A:V.303 Hydrogen bonds: A:Y.51 Salt bridges: A:H.113

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 31 residues within 4Å: Chain A: G.21, T.22, W.23, K.24, D.46, Y.51, K.80, H.113, S.162, N.163, Q.186, Y.212, S.213, P.214, L.215, G.216, S.217, P.218, D.219, L.231, A.248, I.263, P.264, K.265, S.266, V.267, T.268, R.271, E.274, N.275 Ligands: EPR.1 34 PLIP interactions: 34 interactions with chain A Hydrophobic interactions: A:W.23 Hydrogen bonds: A:T.22, A:W.23, A:D.46, A:S.162, A:N.163, A:N.163, A:S.213, A:L.215, A:G.216, A:S.217, A:S.217, A:D.219, A:D.219, A:K.265, A:V.267, A:T.268, A:T.268, A:E.274, A:N.275 Water bridges: A:D.219, A:T.246, A:K.265, A:R.271, A:R.271, A:R.271, A:R.271, A:R.271, A:R.271 Salt bridges: A:K.24, A:K.265, A:R.271 pi-Stacking: A:Y.212 pi-Cation interactions: A:R.271

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, L. et al., Inhibitor selectivity between aldo-keto reductase superfamily members AKR1B10 and AKR1B1: Role of Trp112 (Trp111). Febs Lett. (2013)

Release Date

2013-10-23

Peptides

Aldo-keto reductase family 1 member B10: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aldo-keto reductase family 1 member B10

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