SMTL ID : 4jja.1

Crystal structure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: L.181, V.197, T.198, V.199, P.201, L.367 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.199 Water bridges: A:V.197 GOL.2: 9 residues within 4Å: Chain A: S.218, N.220, L.221, Y.230, R.245, F.251 Ligands: GOL.3, GOL.5, CL.6 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.218, A:N.220, A:Y.230, A:Y.230, A:R.245, A:R.245 GOL.3: 8 residues within 4Å: Chain A: E.58, F.116, Y.117, T.118, Y.119, S.218 Ligands: GOL.2, GOL.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.58, A:Y.117, A:T.118, A:T.118 GOL.4: 4 residues within 4Å: Chain A: M.157, G.165, L.166, W.188 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.165 Water bridges: A:K.160 GOL.5: 9 residues within 4Å: Chain A: F.116, T.118, Y.230, C.234, E.237, R.245, L.328 Ligands: GOL.2, GOL.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.116, A:E.237, A:E.237, A:R.245

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 5 residues within 4Å: Chain A: S.218, P.219, N.220, R.245 Ligands: GOL.2 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a hypothetical protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution. To be published

Release Date

2013-04-03

Peptides

hypothetical protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

hypothetical protein