SMTL ID : 4jn6.1

Crystal Structure of the Aldolase-Dehydrogenase Complex from Mycobacterium tuberculosis HRv37

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

hetero-2-2-mer

Ligands

2 x OXL: OXALATE ION(Non-covalent)

OXL.1: 10 residues within 4Å: Chain A: R.15, D.16, F.137, M.139, V.167, S.169, H.198, H.200, Y.289 Ligands: MN.2 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.289 Water bridges: A:R.15 Salt bridges: A:R.15, A:H.198, A:H.198 OXL.3: 10 residues within 4Å: Chain C: R.15, D.16, F.137, M.139, V.167, S.169, H.198, H.200, Y.289 Ligands: MN.5 6 PLIP interactions: 6 interactions with chain C Water bridges: C:R.15, C:Y.289 Salt bridges: C:R.15, C:H.198, C:H.198, C:H.200

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 5 residues within 4Å: Chain A: D.16, H.198, H.200, N.234 Ligands: OXL.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.16, A:H.198, A:H.200, H2O.3 MN.5: 5 residues within 4Å: Chain C: D.16, H.198, H.200, N.234 Ligands: OXL.3 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.16, C:H.198, C:H.200, H2O.8

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain C: H.19, H.23, Y.60, H.295 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:H.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carere, J. et al., Characterization of an Aldolase-Dehydrogenase Complex from the Cholesterol Degradation Pathway of Mycobacterium tuberculosis. Biochemistry (2013)

Release Date

2013-05-08

Peptides

4-hydroxy-2-oxovalerate aldolase: AC
Acetaldehyde dehydrogenase: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

4-hydroxy-2-oxovalerate aldolase

Acetaldehyde dehydrogenase