SMTL ID : 4jnc.1

Soluble Epoxide Hydrolase complexed with a carboxamide inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

homo-dimer

Ligands

2 x 1LF: 1-[4-methyl-6-(methylamino)-1,3,5-triazin-2-yl]-N-[2-(trifluoromethyl)benzyl]piperidine-4-carboxamide(Non-covalent)

1LF.1: 17 residues within 4Å: Chain A: F.31, P.32, D.99, W.100, M.103, P.125, F.145, Y.147, Q.148, F.151, L.172, M.183, Y.230, V.262, L.263, H.288, W.289 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:P.125, A:F.145, A:Y.230, A:V.262, A:V.262, A:L.263 Hydrogen bonds: A:D.99, A:Q.148, A:Y.230 pi-Stacking: A:H.288 Halogen bonds: A:F.31 1LF.2: 17 residues within 4Å: Chain B: F.31, P.32, D.99, W.100, M.103, P.125, F.145, Y.147, Q.148, F.151, L.172, M.183, Y.230, V.262, L.263, H.288, W.289 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:P.125, B:F.145, B:Y.230, B:V.262, B:V.262, B:L.263 Hydrogen bonds: B:D.99, B:Q.148, B:Y.230 pi-Stacking: B:H.288 Halogen bonds: B:F.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thalji, R.K. et al., Discovery of 1-(1,3,5-triazin-2-yl)piperidine-4-carboxamides as inhibitors of soluble epoxide hydrolase. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-06-05

Peptides

Bifunctional epoxide hydrolase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Bifunctional epoxide hydrolase 2