SMTL ID : 4jq8.1

Crystal structure of EGFR kinase domain in complex with compound 4b

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.83 Å

Oligo State

homo-dimer

Ligands

2 x KJ8: N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]-N~3~,N~3~-dimethyl-beta-alaninamide(Non-covalent)

KJ8.1: 17 residues within 4Å: Chain A: L.25, F.30, V.33, A.50, K.52, M.73, L.95, T.97, Q.98, L.99, M.100, P.101, G.103, R.148, N.149, L.151, D.162 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.25, A:L.25, A:L.25, A:F.30, A:V.33, A:A.50, A:K.52, A:K.52, A:L.151, A:L.151 Hydrogen bonds: A:M.100, A:D.162, A:D.162 Salt bridges: A:D.162 KJ8.2: 17 residues within 4Å: Chain B: L.25, F.30, V.33, A.50, K.52, M.73, L.95, T.97, Q.98, L.99, M.100, P.101, G.103, R.148, N.149, L.151, D.162 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:L.25, B:L.25, B:L.25, B:F.30, B:V.33, B:A.50, B:K.52, B:K.52, B:L.151, B:L.151 Hydrogen bonds: B:M.100, B:D.162, B:D.162 Salt bridges: B:D.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peng, Y.H. et al., Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors. J.Med.Chem. (2013)

Release Date

2013-06-19

Peptides

Epidermal growth factor receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Epidermal growth factor receptor

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