SMTL ID : 4jqc.1

Crystal Structure of E.coli Enoyl Reductase in Complex with NAD and AFN-1252

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 25 residues within 4Å: Chain A: G.33, V.34, A.35, S.39, I.40, Q.60, L.64, C.83, D.84, V.85, S.111, I.112, G.113, I.139, L.164, S.165, K.183, A.209, G.210, P.211, I.212, T.214, L.215, A.216 Ligands: 0WE.2 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.40, A:A.209 Hydrogen bonds: A:I.40, A:Q.60, A:D.84, A:V.85, A:S.111, A:G.113, A:K.183, A:I.212, A:I.212, A:T.214, A:T.214, A:A.216 NAD.3: 25 residues within 4Å: Chain B: G.33, V.34, A.35, S.39, I.40, Q.60, L.64, C.83, D.84, V.85, S.111, I.112, G.113, I.139, L.164, S.165, Y.166, K.183, A.209, G.210, I.212, T.214, L.215, A.216 Ligands: 0WE.4 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:Y.166, B:A.209 Hydrogen bonds: B:G.33, B:S.39, B:I.40, B:Q.60, B:D.84, B:V.85, B:A.86, B:I.112, B:G.113, B:K.183, B:I.212, B:I.212, B:L.215

2 x 0WE: N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide(Non-covalent)

0WE.2: 13 residues within 4Å: Chain A: F.114, A.115, G.117, L.120, Y.166, P.174, N.175, Y.176, K.183, A.216, S.218, I.220 Ligands: NAD.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.120, A:Y.166, A:I.220, A:I.220 Hydrogen bonds: A:A.115, A:A.115, A:G.117 pi-Stacking: A:Y.176, A:Y.176 0WE.4: 12 residues within 4Å: Chain B: F.114, A.115, G.117, L.120, Y.166, P.174, N.175, Y.176, K.183, S.218, G.219 Ligands: NAD.3 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.120, B:N.175 Hydrogen bonds: B:A.115, B:A.115, B:G.117, B:Y.176 pi-Stacking: B:Y.176, B:Y.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Subramanya, H. et al., Crystal Structure of E.coli Enoyl Reductase in Complex with NAD and AFN-1252. TO BE PUBLISHED

Release Date

2014-03-26

Peptides

Enoyl-[acyl-carrier-protein] reductase [NADH] FabI: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Enoyl-[acyl-carrier-protein] reductase [NADH] FabI

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