SMTL ID : 4jtx.1 (1 other biounit)

Crystal structure of 2009 pandemic influenza virus hemagglutinin mutant D225E

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-3-3-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: N.65, E.67, N.88, C.91, P.138, R.222 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 6 residues within 4Å: Chain C: N.65, E.67, D.87, N.88, P.138, R.222 No protein-ligand interaction detected (PLIP)

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 1 residues within 4Å: Chain A: N.12 No protein-ligand interaction detected (PLIP) NAG.4: 2 residues within 4Å: Chain C: K.23, N.24 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.23, C:K.23 NAG.5: 2 residues within 4Å: Chain E: T.16, N.24 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:T.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, W. et al., Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution. J.Virol. (2013)

Release Date

2013-05-01

Peptides

Hemagglutinin: ACE
Hemagglutinin: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

B
B

D
D

F
F

Hemagglutinin

Hemagglutinin

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