SMTL ID : 4juy.1

Crystal structure of the PUB domain of E3 ubiquitin ligase RNF31

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-octamer

Ligands

40 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 3 residues within 4Å: Chain A: H.7, S.9, G.10 Ligand excluded by PLIP UNX.2: 2 residues within 4Å: Chain A: L.67, Q.68 Ligand excluded by PLIP UNX.3: 1 residues within 4Å: Chain A: W.113 Ligand excluded by PLIP UNX.4: 2 residues within 4Å: Chain A: R.73, D.135 Ligand excluded by PLIP UNX.5: 4 residues within 4Å: Chain A: R.40, H.162 Chain F: R.109 Ligands: UNX.28 Ligand excluded by PLIP UNX.6: 2 residues within 4Å: Chain A: F.47, S.48 Ligand excluded by PLIP UNX.7: 3 residues within 4Å: Chain A: E.25, L.29, L.67 Ligand excluded by PLIP UNX.8: 3 residues within 4Å: Chain B: R.109, W.113 Ligands: UNX.25 Ligand excluded by PLIP UNX.9: 3 residues within 4Å: Chain B: G.132, R.134, D.135 Ligand excluded by PLIP UNX.10: 1 residues within 4Å: Chain E: F.16 Ligand excluded by PLIP UNX.11: 3 residues within 4Å: Chain C: H.7, S.9, G.10 Ligand excluded by PLIP UNX.12: 2 residues within 4Å: Chain C: L.67, Q.68 Ligand excluded by PLIP UNX.13: 1 residues within 4Å: Chain C: W.113 Ligand excluded by PLIP UNX.14: 2 residues within 4Å: Chain C: R.73, D.135 Ligand excluded by PLIP UNX.15: 4 residues within 4Å: Chain C: R.40, H.162 Chain H: R.109 Ligands: UNX.38 Ligand excluded by PLIP UNX.16: 2 residues within 4Å: Chain C: F.47, S.48 Ligand excluded by PLIP UNX.17: 3 residues within 4Å: Chain C: E.25, L.29, L.67 Ligand excluded by PLIP UNX.18: 3 residues within 4Å: Chain D: R.109, W.113 Ligands: UNX.35 Ligand excluded by PLIP UNX.19: 3 residues within 4Å: Chain D: G.132, R.134, D.135 Ligand excluded by PLIP UNX.20: 1 residues within 4Å: Chain G: F.16 Ligand excluded by PLIP UNX.21: 3 residues within 4Å: Chain E: H.7, S.9, G.10 Ligand excluded by PLIP UNX.22: 2 residues within 4Å: Chain E: L.67, Q.68 Ligand excluded by PLIP UNX.23: 1 residues within 4Å: Chain E: W.113 Ligand excluded by PLIP UNX.24: 2 residues within 4Å: Chain E: R.73, D.135 Ligand excluded by PLIP UNX.25: 4 residues within 4Å: Chain B: R.109 Chain E: R.40, H.162 Ligands: UNX.8 Ligand excluded by PLIP UNX.26: 2 residues within 4Å: Chain E: F.47, S.48 Ligand excluded by PLIP UNX.27: 3 residues within 4Å: Chain E: E.25, L.29, L.67 Ligand excluded by PLIP UNX.28: 3 residues within 4Å: Chain F: R.109, W.113 Ligands: UNX.5 Ligand excluded by PLIP UNX.29: 3 residues within 4Å: Chain F: G.132, R.134, D.135 Ligand excluded by PLIP UNX.30: 1 residues within 4Å: Chain A: F.16 Ligand excluded by PLIP UNX.31: 3 residues within 4Å: Chain G: H.7, S.9, G.10 Ligand excluded by PLIP UNX.32: 2 residues within 4Å: Chain G: L.67, Q.68 Ligand excluded by PLIP UNX.33: 1 residues within 4Å: Chain G: W.113 Ligand excluded by PLIP UNX.34: 2 residues within 4Å: Chain G: R.73, D.135 Ligand excluded by PLIP UNX.35: 4 residues within 4Å: Chain D: R.109 Chain G: R.40, H.162 Ligands: UNX.18 Ligand excluded by PLIP UNX.36: 2 residues within 4Å: Chain G: F.47, S.48 Ligand excluded by PLIP UNX.37: 3 residues within 4Å: Chain G: E.25, L.29, L.67 Ligand excluded by PLIP UNX.38: 3 residues within 4Å: Chain H: R.109, W.113 Ligands: UNX.15 Ligand excluded by PLIP UNX.39: 3 residues within 4Å: Chain H: G.132, R.134, D.135 Ligand excluded by PLIP UNX.40: 1 residues within 4Å: Chain C: F.16 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, J. et al., Crystal structure of the PUB domain of E3 ubiquitin ligase RNF31. To be Published

Release Date

2013-04-10

Peptides

E3 ubiquitin-protein ligase RNF31: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

G
A

H
B

E3 ubiquitin-protein ligase RNF31