SMTL ID : 4jwx.2 (1 other biounit)

GluN2A ligand-binding core in complex with propyl-NHP5G

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x 1N4: (2R)-amino(1-hydroxy-4-propyl-1H-pyrazol-5-yl)ethanoic acid(Non-covalent)

1N4.1: 11 residues within 4Å: Chain A: H.82, S.108, L.109, T.110, R.115, V.163, G.166, S.167, T.168, Y.208, D.209 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:V.163, A:Y.208 Hydrogen bonds: A:S.108, A:S.108, A:T.110, A:T.110, A:S.167, A:T.168, A:T.168, A:D.209 Water bridges: A:S.108, A:G.166, A:D.209 Salt bridges: A:H.82, A:R.115 pi-Stacking: A:Y.208 1N4.2: 11 residues within 4Å: Chain B: H.82, S.108, L.109, T.110, R.115, V.163, G.166, S.167, T.168, Y.208, D.209 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:V.163, B:Y.208 Hydrogen bonds: B:S.108, B:S.108, B:T.110, B:T.110, B:S.167, B:T.168, B:T.168, B:T.168, B:D.209 Water bridges: B:S.108, B:T.162, B:S.167 Salt bridges: B:H.82, B:R.115 pi-Stacking: B:Y.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hansen, K.B. et al., Structural determinants of agonist efficacy at the glutamate binding site of N-methyl-d-aspartate receptors. Mol.Pharmacol. (2013)

Release Date

2013-05-29

Peptides

GluN2A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

GluN2A

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