SMTL ID : 4jx8.1

Crystal Structure of E.coli Enoyl Reductase in Complex with NAD and AEA16

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x AE6: 6-{(1E)-3-[3-(3-methyl-1-benzofuran-2-yl)azetidin-1-yl]-3-oxoprop-1-en-1-yl}-1,8-naphthyridin-2(1H)-one(Non-covalent)

AE6.1: 16 residues within 4Å: Chain A: F.114, A.115, G.117, L.120, Y.166, I.173, P.174, Y.176, M.179, P.211, A.216, S.218, G.219, I.220, M.226 Ligands: NAD.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.166, A:I.173, A:Y.176, A:Y.176, A:P.211, A:A.216, A:I.220 Hydrogen bonds: A:A.115, A:A.115, A:G.117, A:Y.176 pi-Stacking: A:Y.166 AE6.4: 10 residues within 4Å: Chain B: G.113, F.114, A.115, L.120, Y.166, I.173, P.174, Y.176, A.216 Ligands: NAD.3 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:F.114, B:F.114, B:L.120, B:Y.176, B:A.216 pi-Stacking: B:Y.166

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.2: 26 residues within 4Å: Chain A: G.33, V.34, A.35, S.39, I.40, Q.60, C.83, D.84, V.85, S.111, I.112, G.113, I.139, L.164, S.165, Y.166, M.179, K.183, A.209, G.210, P.211, I.212, T.214, L.215, A.216 Ligands: AE6.1 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:Y.166, A:A.209 Hydrogen bonds: A:G.33, A:Q.60, A:D.84, A:V.85, A:A.86, A:S.111, A:G.113, A:K.183, A:G.210, A:T.214, A:T.214, A:L.215, A:L.215, A:A.216 NAD.3: 23 residues within 4Å: Chain B: G.33, V.34, A.35, S.39, I.40, Q.60, L.64, C.83, D.84, V.85, S.111, I.112, G.113, L.164, S.165, Y.166, K.183, A.209, G.210, I.212, T.214, L.215 Ligands: AE6.4 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:I.40, B:Y.166 Hydrogen bonds: B:V.34, B:I.40, B:Q.60, B:D.84, B:V.85, B:I.112, B:K.183, B:T.214, B:T.214, B:T.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Subramanya, H. et al., Crystal Structure of E.coli Enoyl Reductase in Complex with NAD and AEA16. To be Published

Release Date

2014-04-02

Peptides

Enoyl-[acyl-carrier-protein] reductase [NADH] FabI: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Enoyl-[acyl-carrier-protein] reductase [NADH] FabI

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