SMTL ID : 4k03.1

Crystal structure of Drosophila Cryprochrome

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 24 residues within 4Å: Chain A: S.284, M.285, S.286, L.289, Q.330, L.331, W.333, R.334, F.337, W.394, L.395, H.397, R.400, N.401, A.404, F.423, D.429, A.430, D.431, V.434, C.435, N.438, W.439, F.553 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:R.400, A:A.404, A:F.423, A:F.423, A:N.438, A:W.439 Hydrogen bonds: A:S.284, A:S.284, A:S.284, A:M.285, A:Q.330, A:H.397, A:H.397, A:R.400, A:R.400, A:D.429, A:A.430, A:D.431, A:D.431, A:D.431, A:N.438, A:N.438 Water bridges: A:S.286, A:R.317, A:R.334 pi-Cation interactions: A:R.400 FAD.2: 24 residues within 4Å: Chain B: R.256, S.284, S.286, L.289, Q.330, L.331, W.333, R.334, F.337, W.394, L.395, H.397, R.400, N.401, A.404, L.427, D.429, A.430, D.431, V.434, C.435, N.438, W.439, F.553 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:R.400, B:A.404, B:N.438, B:W.439 Hydrogen bonds: B:R.256, B:S.284, B:S.284, B:S.284, B:M.285, B:Q.330, B:H.397, B:R.400, B:D.431, B:D.431, B:D.431, B:N.438, B:N.438 Water bridges: B:H.397 pi-Cation interactions: B:R.400, B:R.400

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czarna, A. et al., Structures of Drosophila cryptochrome and mouse cryptochrome1 provide insight into circadian function. Cell(Cambridge,Mass.) (2013)

Release Date

2013-06-26

Peptides

Cryptochrome-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cryptochrome-1