SMTL ID : 4k18.1

Structure of PIM-1 kinase bound to 5-(4-cyanobenzyl)-N-(4-fluorophenyl)-7-hydroxypyrazolo[1,5-a]pyrimidine-3-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 2 residues within 4Å: Chain A: R.227, S.230 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.230 Water bridges: A:S.230 Salt bridges: A:R.227

1 x 1OB: 5-(4-cyanobenzyl)-N-(4-fluorophenyl)-7-hydroxypyrazolo[1,5-a]pyrimidine-3-carboxamide(Non-covalent)

1OB.2: 16 residues within 4Å: Chain A: L.13, G.14, S.15, F.18, V.21, A.34, K.36, L.89, E.90, R.91, P.92, V.95, D.97, L.143, I.154, D.155 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.21, A:A.34, A:L.143, A:L.143, A:L.143, A:I.154 Hydrogen bonds: A:D.97 Water bridges: A:D.155 pi-Stacking: A:F.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, X. et al., Discovery of novel pyrazolo[1,5-a]pyrimidines as potent pan-Pim inhibitors by structure- and property-based drug design. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-05-15

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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