SMTL ID : 4k2a.2 (1 other biounit)

Crystal structure of haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: N.34, W.100, F.144, F.163, L.200, P.201 Ligand excluded by PLIP CL.2: 5 residues within 4Å: Chain A: H.32, G.33, T.36, Q.98, Q.270 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain B: N.34, W.100, F.163, L.200, P.201 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain B: H.32, G.33, T.36, Q.98, Q.270 Ligand excluded by PLIP

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 5 residues within 4Å: Chain A: D.272, H.273, P.274, E.275, A.276 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.275, A:A.276 Water bridges: A:D.272 ACT.6: 5 residues within 4Å: Chain B: D.272, H.273, P.274, E.275, A.276 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.275, B:A.276 ACT.7: 3 residues within 4Å: Chain B: P.169, I.172, L.173 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:P.169 Water bridges: B:I.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaloupkova, R. et al., Structural and functional analysis of a novel haloalkane dehalogenase with two halide-binding sites. Acta Crystallogr.,Sect.D (2014)

Release Date

2014-06-25

Peptides

Haloalkane dehalogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Haloalkane dehalogenase

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