SMTL ID : 4k35.3 (2 other biounits)

The structure of a glycoside hydrolase family 81 endo-[beta]-1,3-glucanase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 6 residues within 4Å: Chain A: Y.386, F.468, D.475, Y.478, H.479, E.557 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.475, A:H.479, A:E.557 Water bridges: A:Y.386 TRS.2: 4 residues within 4Å: Chain A: D.98, F.632, E.634, T.672 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.98, A:E.634 Water bridges: A:E.634, A:T.672 TRS.3: 6 residues within 4Å: Chain B: Y.386, F.468, D.475, Y.478, H.479, E.557 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:D.475, B:D.475, B:H.479, B:E.557 Water bridges: B:E.553, B:E.553 TRS.4: 4 residues within 4Å: Chain B: F.632, E.634, T.672, V.673 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.634, B:T.672 Water bridges: B:L.633, B:E.634

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.5: 7 residues within 4Å: Chain A: P.655, I.687, H.720 Chain B: P.655, I.687, P.719, H.720 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:P.655, B:P.655, B:P.719 Water bridges: A:I.687, B:R.718

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, P. et al., The structure of a glycoside hydrolase family 81 endo-[beta]-1,3-glucanase. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-10-02

Peptides

glycoside hydrolase family 81 endo-beta-1,3-glucanase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

glycoside hydrolase family 81 endo-beta-1,3-glucanase

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