SMTL ID : 4k36.2 (1 other biounit)

His6 tagged anSMEcpe with bound AdoMet

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

monomer

Ligands

3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 11 residues within 4Å: Chain A: C.255, G.256, C.261, T.262, Q.264, C.276, F.278, Y.279, C.330, R.331, R.332 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.255, A:C.261, A:C.276, A:C.330 SF4.2: 9 residues within 4Å: Chain A: E.316, C.317, C.320, F.323, C.326, G.328, C.348, Y.351, K.352 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.317, A:C.320, A:C.326, A:C.348 SF4.3: 9 residues within 4Å: Chain A: C.15, L.17, C.19, C.22, H.25, G.66, N.100, R.134 Ligands: SAM.4 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:C.15, A:C.19, A:C.22, SAM.4

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.4: 19 residues within 4Å: Chain A: Y.21, C.22, F.23, Y.24, G.65, G.66, E.67, Q.98, T.99, N.100, S.122, R.134, L.163, V.165, I.192, N.193, C.194, L.195 Ligands: SF4.3 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:Y.21, A:E.67, A:E.67, A:S.122, A:R.134, A:L.195, A:L.195 Salt bridges: A:R.134 pi-Cation interactions: A:Y.24

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 5 residues within 4Å: Chain A: Q.190, F.191, I.237, R.238, Y.239 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain A: K.127, N.131, D.141, F.143, S.144 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goldman, P.J. et al., X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-05-08

Peptides

Anaerobic sulfatase-maturating enzyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Anaerobic sulfatase-maturating enzyme

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