- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 4 residues within 4Å:- Chain A: Y.83, D.84, F.124, N.127
Ligand excluded by PLIPCL.3: 3 residues within 4Å:- Chain A: D.311, Y.314, R.323
Ligand excluded by PLIPCL.10: 4 residues within 4Å:- Chain B: Y.83, D.84, F.124, N.127
Ligand excluded by PLIPCL.11: 3 residues within 4Å:- Chain B: D.311, Y.314, R.323
Ligand excluded by PLIP- 2 x 07V: (5R)-2-methyl-5-(prop-1-en-2-yl)cyclohex-2-en-1-one(Non-covalent)
07V.4: 17 residues within 4Å:- Chain A: T.38, M.40, G.73, F.75, Y.83, A.86, Q.115, V.117, L.119, H.192, N.195, Y.197, F.251, P.296, F.297, Y.376
- Ligands: FMN.1
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:Y.83, A:V.117, A:Y.197, A:F.251, A:P.296
- Hydrogen bonds: A:H.192, A:N.195
07V.12: 17 residues within 4Å:- Chain B: T.38, M.40, G.73, F.75, Y.83, A.86, Q.115, V.117, L.119, H.192, N.195, Y.197, F.251, P.296, F.297, Y.376
- Ligands: FMN.9
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:Y.83, B:V.117, B:Y.197, B:F.251, B:P.296
- Hydrogen bonds: B:H.192, B:N.195
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.5: 2 residues within 4Å:- Chain A: Y.376
- Ligands: 1PE.8
No protein-ligand interaction detected (PLIP)NA.6: 3 residues within 4Å:- Chain A: D.52, W.53
- Ligands: PGE.7
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:W.53
NA.13: 2 residues within 4Å:- Chain B: Y.376
- Ligands: 1PE.16
No protein-ligand interaction detected (PLIP)NA.14: 3 residues within 4Å:- Chain B: D.52, W.53
- Ligands: PGE.15
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:W.53
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
PGE.7: 4 residues within 4Å:- Chain A: D.52, W.53, A.380
- Ligands: NA.6
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:W.53
- Water bridges: A:D.52
PGE.15: 4 residues within 4Å:- Chain B: D.52, W.53, A.380
- Ligands: NA.14
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:W.53
- 2 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
1PE.8: 7 residues within 4Å:- Chain A: M.40, Y.83, F.124, F.251, F.297, Y.376
- Ligands: NA.5
1 PLIP interactions:1 interactions with chain A- Water bridges: A:Y.376
1PE.16: 7 residues within 4Å:- Chain B: M.40, Y.83, F.124, F.251, F.297, Y.376
- Ligands: NA.13
1 PLIP interactions:1 interactions with chain B- Water bridges: B:Y.376
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pompeu, Y.A. et al., X‑ray Crystallography Reveals How Subtle Changes Control the Orientation of Substrate Binding in an Alkene Reductase. ACS CATALYSIS (2013)
- Release Date
- 2013-10-09
- Peptides
- NADPH dehydrogenase 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.55 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x 07V: (5R)-2-methyl-5-(prop-1-en-2-yl)cyclohex-2-en-1-one(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 2 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pompeu, Y.A. et al., X‑ray Crystallography Reveals How Subtle Changes Control the Orientation of Substrate Binding in an Alkene Reductase. ACS CATALYSIS (2013)
- Release Date
- 2013-10-09
- Peptides
- NADPH dehydrogenase 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A