SMTL ID : 4k94.1

Crystal structure of KIT D4D5 fragment in complex with anti-Kit antibody Fab19

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain B: S.30, Y.54, T.74 Chain C: N.16, T.18 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain C Hydrophobic interactions: B:Y.54, B:T.74 Hydrogen bonds: B:S.30, C:N.16 Water bridges: C:T.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reshetnyak, A.V. et al., Structural basis for KIT receptor tyrosine kinase inhibition by antibodies targeting the D4 membrane-proximal region. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-10-16

Peptides

Fab19 heavy chain: A
Fab19 light chain: B
Mast/stem cell growth factor receptor Kit: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
C

Fab19 heavy chain

Fab19 light chain

Mast/stem cell growth factor receptor Kit

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