SMTL ID : 4k95.5 (11 other biounits)

Crystal Structure of Parkin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 6.50 Å

Oligo State

monomer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.155, C.159, C.217, H.220 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.155, A:C.159, A:C.217, A:H.220 ZN.2: 4 residues within 4Å: Chain A: C.171, C.174, C.201, C.206 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.171, A:C.174, A:C.201, A:C.206 ZN.3: 4 residues within 4Å: Chain A: C.243, C.246, C.265, C.268 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.243, A:C.246, A:C.265, A:C.268 ZN.4: 4 residues within 4Å: Chain A: C.258, H.262, C.294, C.298 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.258, A:H.262, A:C.294, A:C.298 ZN.5: 4 residues within 4Å: Chain A: C.337, C.342, C.357, C.365 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.337, A:C.342, A:C.357, A:C.365 ZN.6: 4 residues within 4Å: Chain A: C.370, C.373, H.378, C.382 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.370, A:C.373, A:H.378, A:C.382 ZN.7: 4 residues within 4Å: Chain A: C.423, C.426, C.441, C.446 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.423, A:C.426, A:C.441, A:C.446 ZN.8: 4 residues within 4Å: Chain A: C.451, C.454, C.462, H.466 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.451, A:C.454, A:C.462, A:H.466

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Trempe, J.F. et al., Structure of parkin reveals mechanisms for ubiquitin ligase activation. Science (2013)

Release Date

2013-05-15

Peptides

E3 ubiquitin-protein ligase parkin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

E3 ubiquitin-protein ligase parkin

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