SMTL ID : 4kaf.1 (1 other biounit)

Crystal Structure of Haloalkane dehalogenase HaloTag7 at the resolution 1.5A, Northeast Structural Genomics Consortium (NESG) Target OR151

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.1: 9 residues within 4Å: Chain A: N.51, D.116, W.117, F.159, F.178, F.215, P.216, L.219, L.256 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.117 SCN.6: 9 residues within 4Å: Chain B: N.51, D.116, W.117, F.159, F.178, F.215, P.216, L.219, L.256 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:W.117

6 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: E.224, P.225, A.226 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.224, A:A.226 Water bridges: A:N.227 NA.3: 5 residues within 4Å: Chain A: P.184, V.187, R.189, P.190, L.191 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.184, A:L.191 NA.4: 4 residues within 4Å: Chain A: D.21, H.23, D.36, V.37 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.21, A:H.23 Water bridges: A:D.36 NA.5: 1 residues within 4Å: Chain A: M.185 No protein-ligand interaction detected (PLIP) NA.7: 3 residues within 4Å: Chain B: E.224, P.225, A.226 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.224, B:A.226 Water bridges: B:N.227 NA.8: 2 residues within 4Å: Chain B: F.18, P.19 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:F.18 Water bridges: B:F.18

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.9: 9 residues within 4Å: Chain B: F.18, H.33, S.54, S.55, Y.56, D.75, G.80, K.81 Ligands: EDO.10 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:H.33, B:S.54, B:S.55, B:D.75, B:K.81, B:K.81 Water bridges: B:H.198, B:H.198, B:E.201, B:E.201 EDO.10: 7 residues within 4Å: Chain B: F.18, F.20, D.21, P.22, H.33, K.81 Ligands: EDO.9 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:F.20, B:D.21, B:H.33, B:K.81

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.11: 5 residues within 4Å: Chain B: F.91, D.92, N.227, I.228, L.231 7 PLIP interactions: 1 interactions with chain A, 6 interactions with chain B Water bridges: A:D.92, B:D.92, B:D.92, B:D.92, B:H.124, B:L.231 Hydrogen bonds: B:D.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuzin, A.P. et al., Northeast Structural Genomics Consortium Target OR151. To be Published

Release Date

2013-06-05

Peptides

Haloalkane dehalogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Haloalkane dehalogenase

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