SMTL ID : 4kaj.1

X-Ray Structure of the complex of Haloalkane dehalogenase HaloTag7 with HALTS, Northeast Structural Genomics Consortium (NESG) Target OR151

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x 1Q9: N-(2-ethoxy-3,5-dimethylbenzyl)-1H-tetrazol-5-amine(Non-covalent)

1Q9.1: 17 residues within 4Å: Chain A: N.51, P.52, D.116, W.117, W.151, A.155, F.159, F.178, T.182, L.183, M.185, G.186, P.216, L.219, V.255, N.282, L.283 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.151, A:A.155, A:T.182, A:V.255, A:L.283 Hydrogen bonds: A:N.51, A:D.116

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 1 residues within 4Å: Chain A: G.29 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:G.29, H2O.1, H2O.1, H2O.3 MN.4: 1 residues within 4Å: Chain A: D.86 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.86, H2O.4, H2O.6, H2O.8, H2O.9

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 3 residues within 4Å: Chain A: H.198, E.201 Ligands: EDO.6 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.201, A:E.201 NA.5: 2 residues within 4Å: Chain A: E.193, D.197 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.193

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 8 residues within 4Å: Chain A: F.18, S.54, S.55, Y.56, D.75, G.80, K.81 Ligands: NA.3 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.33, A:S.54, A:D.75, A:K.81, A:H.198 Water bridges: A:E.201 EDO.7: 2 residues within 4Å: Chain A: N.205, V.207 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.205, A:N.205

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.8: 1 residues within 4Å: Chain A: E.201 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuzin, A. et al., Northeast Structural Genomics Consortium Target OR151. To be Published

Release Date

2013-06-05

Peptides

PENTAETHYLENE GLYCOL: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PENTAETHYLENE GLYCOL