SMTL ID : 4kbk.1 (5 other biounits)

CK1d in complex with (3S)-3-{4-[3-(4-fluorophenyl)-1-methyl-1H-pyrazol-4-yl]pyridin-2-yl}morpholine inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x 1QG: (3S)-3-{4-[3-(4-fluorophenyl)-1-methyl-1H-pyrazol-4-yl]pyridin-2-yl}morpholine(Non-covalent)

1QG.1: 19 residues within 4Å: Chain A: I.29, S.31, G.32, I.37, L.39, A.50, I.51, K.52, Y.70, M.94, M.96, E.97, L.98, L.99, G.100, P.101, L.149, I.162, D.163 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.37, A:A.50, A:K.52, A:M.96, A:L.149 Hydrogen bonds: A:L.99

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.192, Q.228, G.229, K.238 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.229 Water bridges: A:R.192, A:Q.228, A:L.230, A:K.238 Salt bridges: A:R.192, A:K.238 SO4.3: 4 residues within 4Å: Chain A: R.141, K.168, K.185, E.203 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.141, A:R.141, A:K.185 Salt bridges: A:R.141, A:K.168, A:K.185 SO4.4: 4 residues within 4Å: Chain A: S.281, R.284, Q.285, R.288 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.285 Salt bridges: A:R.284, A:R.288 SO4.5: 3 residues within 4Å: Chain A: S.135, R.171, H.176 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.171, A:H.176, A:K.277

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mente, S. et al., Ligand-protein interactions of selective casein kinase 1 delta inhibitors. J.Med.Chem. (2013)

Release Date

2013-09-18

Peptides

Casein kinase I isoform delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase I isoform delta

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