SMTL ID : 4ke5.1 (1 other biounit)

HCV NS5B GT1B N316Y with GSK5852

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

monomer

Ligands

2 x 1PV: [4-({[5-cyclopropyl-2-(4-fluorophenyl)-3-(methylcarbamoyl)-1-benzofuran-6-yl](methylsulfonyl)amino}methyl)-2-fluorophenyl]boronic acid(Non-covalent)

1PV.1: 15 residues within 4Å: Chain A: P.199, R.202, L.206, L.316, Y.318, D.321, V.323, I.365, S.367, C.368, S.370, L.386, M.416, Y.417, Y.450 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.206, A:L.206, A:L.316, A:Y.318, A:Y.318, A:V.323, A:L.386, A:Y.450 Hydrogen bonds: A:R.202, A:R.202, A:Y.318, A:Y.318, A:S.367, A:S.367 Water bridges: A:L.386 1PV.2: 14 residues within 4Å: Chain A: L.421, M.425, L.476, H.477, S.478, Y.479, I.484, L.499, R.500, R.503, W.530, A.531, V.532, K.533 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:W.530 Hydrogen bonds: A:S.478, A:Y.479, A:R.500 Water bridges: A:H.477, A:R.500, A:K.535, A:K.535 pi-Cation interactions: A:R.503

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maynard, A. et al., Discovery of a Potent Boronic Acid Derived Inhibitor of the HCV RNA-Dependent RNA Polymerase. J.Med.Chem. (2014)

Release Date

2013-05-15

Peptides

HCV Polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HCV Polymerase

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