- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.83 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x ACT: ACETATE ION(Non-functional Binders)
ACT.3: 11 residues within 4Å:- Chain A: H.96, H.98, D.100, H.101, H.185, D.207, Y.210, H.252
- Ligands: ZN.1, ZN.2, EDO.7
5 PLIP interactions:5 interactions with chain A- Salt bridges: A:H.96, A:H.98, A:H.101, A:H.185, A:H.252
ACT.12: 11 residues within 4Å:- Chain B: H.96, H.98, D.100, H.101, H.185, D.207, Y.210, H.252
- Ligands: ZN.10, ZN.11, EDO.16
5 PLIP interactions:5 interactions with chain B- Salt bridges: B:H.96, B:H.98, B:H.101, B:H.185, B:H.252
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 8 residues within 4Å:- Chain A: V.21, V.31, R.32, F.33, T.211, H.252, D.253, M.254
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.32, A:M.254
- Water bridges: A:R.32
EDO.5: 3 residues within 4Å:- Chain A: R.117, V.120, F.164
1 PLIP interactions:1 interactions with chain A- Water bridges: A:F.164
EDO.6: 2 residues within 4Å:- Chain A: R.117, S.118
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.117
EDO.7: 8 residues within 4Å:- Chain A: L.14, L.16, F.33, E.65, F.99, D.100, F.223
- Ligands: ACT.3
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.65
EDO.13: 8 residues within 4Å:- Chain B: V.21, V.31, R.32, F.33, T.211, H.252, D.253, M.254
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.32, B:M.254
- Water bridges: B:R.32
EDO.14: 3 residues within 4Å:- Chain B: R.117, V.120, F.164
1 PLIP interactions:1 interactions with chain B- Water bridges: B:F.164
EDO.15: 2 residues within 4Å:- Chain B: R.117, S.118
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:R.117
EDO.16: 8 residues within 4Å:- Chain B: L.14, L.16, F.33, E.65, F.99, D.100, F.223
- Ligands: ACT.12
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.65, B:D.100
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kobayashi, J. et al., Structure of 4-pyridoxolactonase from Mesorhizobium loti. Acta Crystallogr.,Sect.F (2014)
- Release Date
- 2014-04-09
- Peptides
- 4-pyridoxolactonase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.83 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x ACT: ACETATE ION(Non-functional Binders)
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kobayashi, J. et al., Structure of 4-pyridoxolactonase from Mesorhizobium loti. Acta Crystallogr.,Sect.F (2014)
- Release Date
- 2014-04-09
- Peptides
- 4-pyridoxolactonase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A